Lates calcarifer (barramundi perch): 108878425
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Entry
108878425 CDS
T04895
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108878425
Cilium and associated proteins [BR:
lcf03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
108878425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TTC28_C
TPR_10
TPR_MalT
CFAP70_TPR_C
TPR_16
TPR_SusR
TPR_17
RPN7
TPR_11
TPR_14
DUF6340
TPR_BSK1_C
TPR_6
TPR_9
TPR_NPHP3
TPR_19
PUB
TPR_YpiA_C
BTAD
HlyE
AP4E_app_platf
ARM_TT21_5th
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
108878425
NCBI-ProteinID:
XP_018524621
UniProt:
A0A4W6G4W4
LinkDB
All DBs
Position
LG13:complement(15076395..15233762)
Genome browser
AA seq
2482 aa
AA seq
DB search
MEKQTTLKEKFSIFGSRTAGRPIRCVGGDDGARYGLSKAEFMEKVQQSNEACQRGDFQVA
VHLYSDALQADPQNCILYSNRSAALLKLGQHQAALDDAEKACELNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTAGHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTGYM
QQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRNQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFDNAVQCH
EQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEKSIEMRAY
AGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLAIAQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPDLQDMESEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVAGAIQFY
EQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQELGDVSGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPVVEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAVMDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQE
KAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQAI
SCLERQLAIARDTQDRLLEGDASCGLGVVYQAMGEYETALRCHQSDLEIAEEAGSPSRQA
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPY
TPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGVSEGGSDFQ
EGGGSGVVSGSSLEQHIASAREALGVESYYSRGCSSSETESEAGDLLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGNSSLPRRSSNLGKPPLRALYDL
LIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIH
GLGSSAKAHSRRPGPTPCGGVSMAAVVGNPRLPSPVMDRWLWGPMPSAEEEALMVAELLG
CQPLAGSAATKERVMSALTQAECAHFATHISWKLAALVLTPNPEGVPGGASASVGVGTVG
RGAGGRRGSSGRGRKGSIGSGYTIPESLHMQDDSSDVESICDSPPLQEFLLTAADILDLR
LPVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVAASKVFVHAFYTA
LLNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYP
DRVRDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLTAVGFRLDSA
GTGIPAAVFFPTADPGDRLQQCSTTLQSLLGLPPPALQALCKLITASEAGEQLINRAVKN
MVAMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVV
LKTGKLANRRTLHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPLPMGYSSL
PFSPPCLDNQASDAISVYSLSSVASSMSFASKSECDFLSHRQRSGATAHYSVHKHPHVPR
SRSSPHGAAAAVAGARGDEEEYEGFSIISSEPLGSHCDSLPLPPGHSQRHHRGGRGVVGG
SSAGAGRGYTVSVSSRGSVSTPTSPVKTCLVPSPNSPFQKVGKVSSSDTGESDQSSTETD
STVKSQEEKTVPLDPQELAQKILEETQSHLRAVGSLQRAGAEGGTGGGTSARSSAFRSSE
TSAFSRPNSSASGRAQSSPRPKPPSRSSSLQKISSGYNSPAVSESSQKEGSHPSPTLDSH
AQFKLKYPSSPYSGHISRSPSNVSPSSGHQSPAGSAPSPALSYSSTGSACSTSADAPDLD
RLRRGVIDEKVQAIHNLKTFWANAAAQQQQQQHLGPVKAVHSTPGPLASASRDVLSLLNL
SPRHCSPNDTQDSLELRELGLQSLDRGSKNSSNGHHCSNPRKVAPSPTISTSSSPGARSI
RLPAGNGYKFLSPGRFFPSSKC
NT seq
7449 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaaacgactctgaaagaaaagttttcaatctttggttcgcggacagcgggc
agacctatccgatgtgttggtggagacgatggggccaggtatggtctcagcaaagcagag
ttcatggaaaaagtgcagcagagcaatgaagcgtgtcagcgcggtgactttcaggtggcc
gtccatttgtacagcgacgccttgcaagctgacccacagaactgcatcctgtacagtaac
cgttcagcagctcttctcaaactggggcaacaccaggcggctctggatgatgctgaaaaa
gcttgtgagcttaatcccaagtggcccaaggcatacttccgacagggtgttgcccttcag
taccttggtcgccatgccgacgcactggccgccttcgcctcggggctggcccaagacccc
aagagcctgcagctactggtgggcatggtagaggccgccatgaaatcaccactacgagag
tctctcgagcccacctatcagcagctgcaaaagatgaagctggacaaaagtccctttgtg
gtggtgtctgtgattggccaggagctgctgacagcaggccaccacacagcctctgttgtg
gtgctggaggctgctttgaagatcggcacatgcagcctcaagctacgcggctccgtcttc
tcggccctcagcagcgcccactggtctctgggcaacaccgagaagagcaccggctacatg
cagcaggacttagaggtggccaagaccttaggtgaccaaacaggtgaatgccgtgctcat
gggaatctgggttcggcattcttctccaagggaaactaccgtgaagcgctgaccaaccat
cgcaaccagctggttctggccatgaagctaaaggacagagaggctgcttcaatggcgctg
agcagcttgggccacgtatatacagccataggggactatccaaatgccctagccagccac
aagcagtgcgtcctgctggccaagcagtccaaggatcagctgtctgaggctcgcgagctg
ggaaacatgggggctgtctacatcgccatgggagactttgacaatgccgtccaatgccac
gagcagcacctgggcattgccaaggccctggaaaataaacgagaggaagctcgggcctac
agtaacctgggcagtgcctaccactatcaccgtaattttgacaaggccatgtcctaccac
actcatgttctggagcttgcccaagagctggaggagaagtccattgagatgagagcctac
gcagggctgggtcatgctgcccgctgcatgcaggacttggagagggccaagcagtaccac
gaacagcagctgtctatagctgagggtttgaaggacagagccgcagagggaagggcctcc
tccaatctgggcatcatccaccagatgaagggggactatgagactgcactgaaactccac
aaaacacacctggccatcgctcaggagctgaatgactacgctgctcagggccgggcctat
gggaacatgggtaatgcctacaatgccctgggagcctttgatcaggctgttcgctatcac
cgccaggagctgcagatctccatggaggtcaatgaccgggcctcgcaggcttccacccat
ggcaacctggctgtggcttaccaagccctgggagcccatgaccgtgctctgcagcattac
cagaaccacctcaacatagctcgtgagctcagagatgtccagagcgaggcgcgggctctg
ggcaacctcggcaacttccactgctctcgaggagagttccctcaggccgtgccctactac
gagcagtacctccggctgtcccctgacctccaagacatggagagtgaagggaaagtttgt
cacaatctgggttatgcccactactgtctgggcaactatcaggatgccgtcaaatactat
gagcaggacctagctctggccaaggacctccatgataaactgagtcaggccaaggcatac
tgtaaccttggtttggcattcaaggccctaggagacttcactaaggcagaggagtgtcag
aagtacctgctgtcactggcccagtctttaaacaatgcacaggctcgcttcagagctctg
gggaacctgggagacatatttgtctgtaaaaaggatgtggccggagccattcagttttat
gagcagcaactggccttagctcaccaggttaaggagcgtaggatggaggcctgtgcctat
gccgccctcggggccacatacagacttgtgcagaaatatgacaaagctctgggctaccac
acccaggagctggaggtgtaccaagagctgggcgacgtgtcaggagagtgcaaagcccac
ggccacctggcagctgtctacatggccctggggaagtacgccatggccttcaagagctat
gaagagcagctggagctaggtcggaggctcaaagatcctgtcgtggaggcccaggtgtac
ggaaacatgggcatcactaaaatgaatgtaggggtgatggaggaagctatcggctacctt
gagcaacagctggccactttacaacaactgagtggcaacgaagcagtaatggacaggggc
agggcctatggaaacctgggagactgttacgaggccctgggagactttgaggaagccatc
aagtattatgaccagtatctgtcagtggcccagagcctcaaccgcatgcaggaccaggag
aaggcctatagaggcttaggcaatggacacagggccatgggaaacctacagcagtcactg
gtgtgttttgagaagcggctagtggtggctcacgagcttggggagtgtggaggtaaagct
caggcctacggtgaactgggcgctctccacagccaactgggtaattacgagcaagccatc
tcttgtctggagcgtcagctggccatcgcccgcgacacccaggacagactactggaggga
gacgccagctgcggtttgggtgttgtatatcaagctatgggagagtatgagacggccctg
cgatgccaccaaagtgacctggagatcgcggaggaagcaggcagcccctcacgccaggcg
cgtgcctacggcaacctgggccttacctatgagtcgctaggaaactacgagcgggcggtc
gtattccaagaacagcacctaagtgtggcggctcagactaatgacttggctgccaagaca
ctggcctatggcagcctggggagaacacaccacgcactgcaaaactactcacaggctgtc
atgtacctgcaggaaggcctgcggcttgcagagcagctggctcggcgtgaggacgaggca
aagatccgccatcgtctggggctctctctatgggccagtgggaatctggaggaagcccaa
catcagctctaccgtgcatctgcactgtttgagaccattcgtcatgaagcccagcacagc
acagactataaactttccttgtttgacctgcaaacctcctgctaccaggcactccaaagg
gtccttgtcagcctaggtcaccacgacgaggccctggcagtagcggagcggggtcgcacg
cgagcctttgccgacctcttggtggagaggcagacaggccagcaggactcagacccctac
accccagtgacggtggagcacatcctggacactgtcaacagccagagggctttggtgctt
tacttctccatggctgctggttacctgtacagctggctgctggctccaggagcaggtatc
ctgaagtttcatgaggtgtacttgggcgagggtgtatcagaaggagggtcagacttccag
gagggtggcggcagcggagtggtcagcggctcatcgttggaacagcacattgccagtgcc
cgtgaggccctcggagtagagtcttattatagccgagggtgttcgagcagtgagacagag
agcgaggcaggagatttgttggaccaacaatttgaggagctcaacaacaagcttaactct
gtcactgatccaacagggttcctgcgcatggtgtccagaaacaacctgttcaacaggagt
tgccagagtatgaccagcctgttcagtaacaccatgtctcctgccaaagatggtaactct
tccctgcctcgacgctccagcaaccttggcaagcctccgctccgggcactttatgatttg
ctcatcgcacctatggaggggggcttgatgcactccagtgggcccgttggcaggcacaga
caactggtgatggtgctggagggagaattgtacctcatcccgttcgccctcctaaaagga
agctcttccaatgaatacctgtatgagcgcttcagcctcattgctgttccctccatccat
ggccttggatccagtgcaaaggctcactctcggcgcccgggaccaactccatgtggtggt
gtctcaatggcagccgtggtggggaatcctcgactgccctcacccgtgatggaccgctgg
ctgtggggacccatgccctctgcagaggaggaggctctgatggtggccgaactgctggga
tgccaaccgctggctggttctgctgctaccaaggagagggtgatgagcgccctcacacaa
gctgagtgtgcccactttgccacccacatttcctggaaattggcagctctggtgctcacc
ccgaaccccgaaggggtgcctggcggggcgagcgccagtgtgggagtgggaacggtgggg
agaggtgccggggggaggagaggcagcagtggtcgaggcaggaagggctccatcggaagc
ggctacaccatcccggagtctctccacatgcaggatgacagcagtgacgtggagagtatc
tgtgacagtccacccctccaggagtttctccttacggctgcagatatattggacctgagg
ttgcctgtcaagctggtggtgctgggttcataccaggagtccagcagcaaggtcacagca
gatggtgtcgtgggattgaccagggccttcctggctgctggggctcagtgtgttctggtg
tccttgtggccggtccctgtcgcagcctccaaggtttttgtccatgccttctacactgcc
ctgcttaatgggaccaaggctagtgcagcactggcagatgccatgaagactgttcagagc
agcaagcagtactcacacccctccaactgggcaggatatatgctgattggcaatgatgtc
aagctcaacagcccgtcttccctcattggacaagctttggcagagattctacagtatcca
gatcgagtgcgtgatgctctgagagttttgctccacctggtggagaagtctcttcagaga
atacagaacggccagcgtaactccatgtatacatcccagcagagtgtggagaacaaggtg
gggggtgtccctggctggcaggccctcctgacagctgtgggcttccgtctcgattctgca
ggcaccggtatccctgctgctgtcttctttcccactgctgacccaggggacaggcttcag
cagtgcagcaccactttacaatcactcttaggtctgccgccaccagctctccaggctttg
tgcaaactcatcacagcttcagaagcaggagagcagctcatcaaccgggctgttaaaaat
atggtggcaatgctccaccaggtgctagtccaactccagacaggagagaaagaacaggat
ttctccctcctgcccattcaggtgtccattagtgtgcagctgtggagactgccaggatgc
catgaatttctggccgctcttggatttgacttatgtgaggtaggccaagaagaagtggtg
ctgaaaacaggcaagctagccaaccgtcgcaccttgcactttgctctccagtctctgctg
gcgctgtttgactccacagaactgcccaagcgtctgagcctggacagctcatcttccctt
gagtctctagcttctgcccaatctgtgtccaaccccctgcccatgggatactcaagcctt
cctttctctcctccttgcctggacaatcaggcatcagatgccatctctgtctatagcctc
agctctgtggcttcctccatgagctttgcctccaagtcagagtgtgatttcctcagtcac
cggcaacgcagcggggccacagcgcactactctgtccacaaacaccctcacgttccccgt
agccgctcctctcctcacggtgcagctgccgcagtggcaggagcccggggtgatgaagag
gaatatgagggtttttccattatcagcagcgagccgctgggaagtcactgtgactctctg
cctctgccaccgggccacagccagcgccaccaccgtggaggcaggggggttgttggtggg
tctagcgcaggagcagggagaggctacactgtatcagtatcatcaaggggcagtgtcagc
acccccacatcccctgtcaaaacatgcttggtgcccagcccaaactcaccattccagaaa
gtgggtaaggtgagcagttcagatacaggtgagtccgaccagtccagcaccgagaccgac
agtactgtcaagtcccaggaagaaaaaacggtccctctggatcctcaggagctggcccag
aagattctggaggagactcagagtcatctacgggctgtgggtagtcttcagcgagctggg
gcagagggtgggacaggtggaggaacctcagctcggagcagcgccttccgctcctctgaa
actagtgctttcagccgtcctaatagcagcgctagtggccgagctcagtcttccccaaga
cccaaacctccctcacgttcctcttcactgcagaagataagctctggctacaacagtcct
gcagtctctgagtcttcccaaaaggagggcagccatccctcacccactctggacagccac
gcacagttcaaattgaagtacccaagctccccatacagcggccacatctctcgttccccg
agtaatgtatctcccagttctggtcaccagtccccagctggtagtgctccatcccctgcc
ctgtcttactcctctactggctctgcctgctctacatcagctgatgccccagacttggac
cgactaagaagaggggtcattgatgaaaaagtccaagctatccacaatttgaagaccttt
tgggctaatgctgcagcccagcaacagcaacagcaacatctaggtcctgtcaaagctgtc
cacagcactcctggaccccttgcttctgccagtagggatgtactgagccttctgaacctc
tccccacgccattgctcccctaatgatacccaagacagcctggagctacgggagctgggg
ctgcagtcactggataggggcagcaagaactcttccaatggacaccactgctccaacccc
agaaaagtggccccatcacctactatttccacaagcagtagccctggtgctcgttctatc
cgactacctgctggcaatggatacaagttcctgtcgcccggaagatttttcccttcctct
aaatgctga
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integrated database retrieval system
