Lates calcarifer (barramundi perch): 108878462
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Entry
108878462 CDS
T04895
Symbol
vps37ba
Name
(RefSeq) VPS37B subunit of ESCRT-I a
KO
K12185
ESCRT-I complex subunit VPS37
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108878462 (vps37ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108878462 (vps37ba)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108878462 (vps37ba)
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
108878462 (vps37ba)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108878462 (vps37ba)
Exosomal proteins of colorectal cancer cells
108878462 (vps37ba)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
DUF6377
Motif
Other DBs
NCBI-GeneID:
108878462
NCBI-ProteinID:
XP_018524708
UniProt:
A0A4W6G5P6
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Position
LG13:20251407..20265449
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AA seq
283 aa
AA seq
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MSSFSNKFGAYTMTQLNEILEDDEKLSKMVQEMDEMQEVQQSKEKTLVNNRTLAEQNLAL
QPRLEHKKEQLTKRYSCLQESFESYQLRKSTLDHKSGNTSLDTLLALLQAEGAKIEEETE
NMADSFLDGDMTLDSFIDAYQSKRKLAHLRRVKIEKLQEMVLKGQRLPQVSVPTSRSQDV
SAAGSLLTEGSNSSSPVPQPRRKPPPPPSQPAPILNPNPAPTAAPQPPVFYSASPYPPIP
PRTGQPFPNVSSGYPSHFLSQYPPALPQRPPPRMAPQPGFIMQ
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtttttctaacaagttcggcgcctacacgatgacacagctcaacgaaattctg
gaggacgacgaaaaactctcgaaaatggttcaagagatggatgagatgcaggaggtccag
cagagcaaggaaaagacactggtcaacaaccgaaccctggctgagcaaaacctcgccctg
cagccgagactggagcacaagaaggagcagctcaccaaacgctacagctgtcttcaggag
agctttgagtcctaccagcttcgcaagtccaccctagaccacaagtcaggaaacacctcc
ctggacactttgctggccctactgcaggcagagggagccaaaatagaagaggagacagag
aatatggctgactctttcctggatggtgacatgaccctggattccttcattgatgcatat
cagagcaagaggaagctagcccacttgagaagggttaaaattgagaagctgcaggagatg
gtgctgaagggccagcggctccctcaggtgtcagtccctacctctcgatctcaggatgtg
tcagcagctggctccctcctcactgagggcagcaacagttcctcccctgttccccagccc
aggcggaaacccccacctcctccatcccagccagccccaattctaaatccaaatccagct
ccaactgctgccccccagcctcctgtcttctactcagcatcaccatacccgccaattcct
cccagaacaggccaaccattccccaatgtctcctctggctaccccagccatttcctatct
cagtacccccctgctttaccacagaggcccccaccgcgtatggccccgcagcctggcttc
atcatgcagtaa
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