Lates calcarifer (barramundi perch): 108878479
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Entry
108878479 CDS
T04895
Symbol
si:ch211-225b11.4
Name
(RefSeq) thyroid adenoma-associated protein homolog isoform X1
KO
K24169
thyroid adenoma-associated protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108878479 (si:ch211-225b11.4)
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Other domain-containing proteins
Armadillo repeat domain-containing proteins
108878479 (si:ch211-225b11.4)
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Gene cluster
GFIT
Motif
Pfam:
DUF2428
TPR_Trm732_C
TPR_Trm732
HEAT
Motif
Other DBs
NCBI-GeneID:
108878479
NCBI-ProteinID:
XP_018524745
UniProt:
A0A4W6G9X5
LinkDB
All DBs
Position
LG13:10338616..10350811
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AA seq
1880 aa
AA seq
DB search
MLSFEELMTSLQDCVITEHQAAENVIQTLRLFCEKLSESSRTGVKRCKERCLEEAAQLLR
QIPEAQLGGLEESHLLLLVRLLMSVQLQVVNISTACRKVDQMLQHLAKVDHLLVYRETHE
CLHSMVHAEQILSFEDLQRACMFLEDSTAGREVLRGSYLSLLKKVSELFPVVLQQESLRD
GPMCYAAVKVCLQTFQLLSGEVAPLVWDKERGDPTVQKILQALMDITLGQCCNRDTRLLA
GTAVAMLINTASESRAGGAAAWSLLHVSDSEPWPLTVGALQVQCAPAGKDGVGRLAVSRG
LLTCCRPHILLSSHADTTETCLLLKGLFPLVFALCEAKLDCHYFAFEVLTLWLKKVKECL
ADIWKMTGVRLLPDDSSLQQQLIHIIWTNAESPVEGVSEFARSAFCLLLDLYEMDCEQFC
DTKKTLYFTLLQRIIKLPWESKAKYHRLCALLPYLGTGTVLDQYAEIPSHLLKCLSTNHL
SPCGSELYKCLIQQQRRELSTGLQKSDSHSELDLADQWAKRWRPVLHKALTSDVTLLQNN
SATHLLPCTFQVFPSSVDHLLASLDPYAPGHLHAWACIASSYRATTGGSPWALRGGSTLE
TLQLALGSADDKVRLAALNLLCCSPKTKDTPTTEEMSIMKLFIPQNLNCESSPFRQHFQA
GVKRFLVRIRDGCLAQVRGQKGKKKGDMTDSERAQELLEQGIGFVEWLGQLPYSYLAPGH
NYQRKKTALLLLSAVLETCTDTWNPDKKKGQPPANMGSLIKCATQRGQWDFFCRSKQLVL
ISCLEDSTNEIRELAAGLLLRFFPPSFPGDIAAVLLTRTKQLLRSPRVQEAQMGALMMKV
LLQKSQDQPEDCRLNSDITVSGGSDPKASCMVRFLVKELEEHYLTAKTDMMLAARAKPIH
GVVSALQKCMLEAGSSVYDTLDHSLTVEVLGLLESISVLLLGVLYGGQDACATEEDAPPS
FCDMGNAISSLIAQTSGGGQADGEECVLLSEEHSLVLTCCWVSLKEIGIFLGSLVERILS
ESKPSKCLLGKEDLKRASKVFKNILLKCRHWGAVEGCCVGFTKFCASLLSSNDPELRDIP
AHMLKQGLQVVQCPRSTSVTRRAAGLPMLILCVVSAEEASKARPLLAHSMQTLLETAKTP
LPENWDQTLDLPQVCAVHTLQALVRGSGLGVAVLQFAPAVAILSLTLLSSPCWAMRNAAL
QLYSSLCSRMLGQRPSSEDGCPTQHGMSPAAFFFHYPALQPFLLGELRGAAQDLQGGPDE
AKLHLQPSLYPVLTLLAQLQPGVQDSTETLSDFLPPLLQLSASPIYSVRVMASKALVAMT
PPSEYMSILVKLTAQLPSPQNRCCHNRLHGQLLQIKAILERALCTDSAPSAALSEVLSRV
DASLWLVTDAQRCPLVRAVYLGVADTLRRFCCETYLSKLSDSLMHDLQTPQTGLQVGLSS
FHQQAIHFLCADLNWARQIWNSFSAVSPDLRLSLVAWVVDGRSLQQTILKEVIQRVLQSN
LKEALLSHSVEYRRTYLAALVAVMAGGDSSLPQHLPQWAPLEEPVLPECLDLLLGDLEDQ
RGGPEFLSQALCAASLLLSQWSDSSTKMSVLLRWCSILERHRSPDAPEVLRMACAEALCV
AGVPLMSHSLNKHSTLPEVMIRLIDTGLYLLQDQNQQVRMKAACFTSMLHHARGGDSRRR
VYLMQVNRALPQLLGLLLEECFDGPGTLEVLLSHLPQSDLRSVLREASEMGCSSLYEQDE
ANVFAEPSVMSAHVLPRLLQMAEKHSESSALAQSLRAWAEQSAAQVADSLAVCKDLQPGE
TLTPAWLALLMDPHFHSTLCSLFTRAAFLLQLLKTSDDARHLCDPSSLRTTLQEVCSLLS
ENGVHFAPALIAAVAGELPL
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgtttgaagagctgatgacaagtcttcaagactgtgtgatcaccgagcatcaa
gcagctgaaaatgtcattcagacactcaggctcttctgtgagaaactgtctgaatcctcc
agaaccggtgtgaaaagatgtaaggagcgctgtttagaggaggctgcccagctgctgaga
cagattccagaggcacagcttggtggtttagaggagagtcatctcctgcttcttgttaga
ctcctcatgtccgtgcagctgcaggtggtcaacatctccacagcctgccgtaaagtggac
cagatgttgcaacatttggcaaaggtggaccacctgttggtttatagagaaacccatgaa
tgtttgcactccatggtccacgctgagcagatcttgtcttttgaggatctgcagagagcc
tgcatgttcctggaagacagcactgctggtcgtgaggtgttgcgagggtcatacctgtcc
ttgctgaagaaagtgtccgagttgttccctgttgtgttgcaacaagaatccctgagagat
gggccgatgtgttatgctgctgtcaaggtgtgcttgcaaacatttcagctgttgtccggt
gaagtggctcctctggtgtgggacaaggagcgtggggatccaacagtgcagaagatcctg
caggctctcatggacataacactcggacagtgctgcaacagggacactcgtcttttggca
ggcactgctgtggccatgctgatcaacacagcatcagagagcagagctggaggagctgct
gcctggagtctgctacatgtctctgactcagagccctggccgctgactgtcggtgctctc
caggtacagtgcgcccctgcaggaaaggacggagtggggaggctggctgtgagcaggggc
ctcctgacctgctgtcgacctcacatcttgctcagttcgcatgcggacaccacagaaacg
tgtttgctgctgaaaggtttgtttcctctggtctttgctttgtgcgaggcgaagctggat
tgccactactttgccttcgaagtgttaacgctgtggctgaagaaagttaaagaatgtctg
gctgatatctggaagatgacgggcgtccggcttctacctgacgacagcagcctgcagcaa
cagctcattcacattatctggaccaatgcagaaagcccagtggaaggtgtgtcagagttt
gcacgcagtgccttttgtctgctgctggacctctatgagatggactgtgagcagttttgt
gacacaaagaagactctttacttcactctacttcagcgaataatcaaactgccttgggaa
tccaaagccaaatatcatcgcctttgtgccctactgccgtacctgggtactggcacggtg
ctggatcagtacgctgaaatacccagtcatctcctgaagtgcttgtcaaccaatcacctc
tcaccatgtggatcagagctgtacaagtgtctgatccagcagcagaggagagagctaagc
accggcttgcaaaagtctgattcacactcggagctggatctggccgatcagtgggcaaaa
cgctggcggccagtccttcacaaggcgctgacgtctgacgtgactcttctgcagaacaac
agcgcgacgcacttattaccctgcacctttcaagtcttcccctcctctgtggatcacctg
ttggcctctctggacccgtacgccccaggccacctccacgcctgggcctgcatcgcaagc
tcttatcgagccacgaccggaggctccccctgggctctgcgaggcggctccacccttgaa
accctccagctggctctggggtctgcggatgacaaagtccgcctcgccgctctcaacctc
ctctgctgcagccccaaaaccaaagacactccaaccacagaggagatgtcaataatgaag
ctgtttattcctcagaacctgaactgtgagtcgtcaccttttcgccagcattttcaggct
ggagtgaagaggtttcttgttcgtatcagagacggctgcttggcacaggtcagaggacag
aagggcaaaaagaaaggagatatgaccgactcagagagggcacaggagttactggagcag
ggaatagggtttgtggaatggttgggtcagcttccatacagctatctggcgccgggacat
aattatcagaggaagaagactgcgctgctgttgctgtctgcagtgctggagacctgcaca
gacacctggaacccagacaaaaagaagggacaacctccagcaaatatggggtctcttatt
aagtgtgccacacaaagaggacagtgggatttcttctgcaggagtaaacagctggtcctc
atcagctgtttagaagattctacaaatgagattcgtgagctcgcagctgggttattgttg
agatttttcccacccagttttcctggtgatatcgctgcagtgctgctcacgcgaaccaaa
cagcttctgcgcagccctcgggtgcaggaggctcagatgggagcgctgatgatgaaggtc
ctccttcagaaatcacaagaccagcctgaggactgcagactgaacagtgacatcactgtc
agcggtggaagtgaccccaaggcttcctgcatggtcagattcctggtgaaggagctggag
gagcattatctgacagctaagactgacatgatgcttgctgccagagccaagcccatacat
ggtgttgtaagtgcccttcagaagtgcatgcttgaggcaggcagcagcgtctatgacaca
cttgaccacagtctgaccgtggaggtgctgggcttgctggaaagcatctctgtgctgctg
ctgggagtcctgtatggaggccaggatgcttgtgccactgaggaggatgccccgccttct
ttttgcgacatgggaaacgccatcagctcactgatagcccaaacatctggaggaggccaa
gcggacggagaggagtgtgttctgctgtctgaagagcacagcctcgttctcacctgctgc
tgggtctccctcaaggaaataggaatctttttaggttctctggtggagagaattctctcg
gaatccaaacccagcaagtgccttctaggaaaagaggatctaaaaagagcatcaaaagta
ttcaagaatattcttctcaaatgtcgtcactggggggcagtagagggatgctgcgtaggc
ttcaccaagttctgtgcctctctgttgagcagcaatgatccagagcttagggatatccca
gcccatatgctgaaacaaggattacaggttgtgcagtgcccgcgttctacgtctgtgacc
aggcgggctgcagggttgcccatgctcattctgtgcgttgtgtcggcagaggaggccagt
aaagcaaggccgctgttagctcacagtatgcagaccttactggagacggccaagacgcct
ctgcccgagaactgggaccaaacgctggacctgccacaggtgtgtgcggttcacactctg
caggccctggtgcgtggctcaggtctaggagtagctgtccttcagtttgctcctgctgta
gccatcttgtcactcactctgctcagctctccctgctgggctatgaggaatgctgcactg
caactttacagttctctgtgctcacgaatgctcggccagcggcccagcagcgaggacggc
tgccctacccagcacggcatgtcccccgctgctttcttcttccactacccagcgctccag
cccttcctcctaggcgagctgagaggggcagcacaagacctccagggtggacctgacgag
gccaagctacacctccaaccctcgctctaccctgtcctcactctgttagcccaactccag
cctggtgtccaagactcaacagaaactttgtcagacttcctgccccctttacttcagctg
tctgccagtcctatctacagtgtgagagtgatggcctctaaggctttggttgccatgact
cccccctcagagtacatgagcatcctcgtcaagctgacggctcaactgcccagtccacag
aatcgctgctgtcacaaccgtctccacggacagctgctgcagatcaaagctatcctggag
agagctctttgcactgacagtgccccttcagctgccctgtctgaggttctgagcagagtg
gatgcgtcgctgtggctggtgactgacgctcaacgctgccctctggtgagagcggtctac
ctcggagtggcagacacactaagaagattctgctgtgagacctacctgtcaaagctcagt
gactcactcatgcatgacctccagacaccccaaacaggacttcaggttggtttgtcatcc
ttccatcaacaagccatccactttctatgtgcagatctaaactgggcacgccaaatctgg
aacagcttctccgctgtaagcccagatctgaggctctcattggttgcgtgggtggtagat
gggcggagtttgcagcaaaccatcttgaaagaggtgatccagagggtgttgcagtcaaac
ctgaaggaggcattgttgagccacagtgtggagtaccgcaggacctacctcgcagccctg
gtggcagtaatggccggaggcgactcttctttaccccagcatcttcctcagtgggcccca
ctggaggagccggttctgcctgagtgtctggatttgttgcttggggaccttgaggaccag
cgaggcgggccagagtttctgtcccaggctctgtgtgctgctagtctgctgctttcccag
tggtcagactccagcacaaagatgtctgtgctcctgcgctggtgtagcatcttggaacgc
caccggtcaccagacgctcctgaggtgctcagaatggcgtgtgctgaagctctgtgcgtg
gctggagtcccactaatgagccacagcctgaacaaacacagcactctgcctgaggtcatg
atcaggttgattgacacgggcctttacctgctgcaagaccaaaaccagcaggtgaggatg
aaagcggcttgttttacctccatgttgcaccatgcgagaggaggagacagtcggaggagg
gtctacctcatgcaggtcaaccgggctctgccccaactgctgggcctgctgctggaggaa
tgcttcgatggccccggcacattggaggtgctgctgagtcacctgcctcagtctgacctc
agatctgtgctgagagaggcctcggagatggggtgttccagcctgtacgagcaggatgag
gccaatgtgttcgcagagccctctgtcatgtcggcacatgtgctgcctcgcctgctgcag
atggctgaaaaacactctgaatcctctgctttggcacagagcctgagagcatgggcagag
cagagtgctgcacaggtggcagacagccttgcagtgtgcaaagacctccagccaggggag
acgttgaccccggcctggctggctctcctcatggacccccatttccacagcaccctgtgc
agcctgttcaccagggctgccttcctcctccaactgttgaaaacgtccgacgacgcacga
cacctctgcgatccttcatccctgcgcacgactctacaagaagtctgcagtctgctcagt
gagaacggtgtccactttgcccctgccttaatagctgccgtggctggagagctgccgctg
tga
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