Lates calcarifer (barramundi perch): 108878492
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Entry
108878492 CDS
T04895
Name
(RefSeq) rho-related BTB domain-containing protein 2 isoform X1
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108878492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108878492
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
lcf04031
]
108878492
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108878492
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
108878492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
Motif
Other DBs
NCBI-GeneID:
108878492
NCBI-ProteinID:
XP_018524771
UniProt:
A0AAJ7PH84
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Position
LG13:14174608..14185873
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AA seq
726 aa
AA seq
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MEPCFLSRPSTNPMQHFLMLRSQLTDSDMDYERPNVETIKCVVVGDNAVGKTRLICARAC
NATLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFA
YGRSDVVVLCFSIANPNSLYHVKTMWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRAR
RPLARPIKSNEILPPERGREVAKELGVPYYETSVVAQFGVKDVFDNAIRAALISRRHLQF
WKSHLRNVQRPLLQAPFLPPKPPPPIITVPPPPTTTEEHPVGLLEDPHCADVILVLQERQ
KIFAHKIYLATSSSKFYDLFIMDTQNEETERPPRGPLSGRELLMRAASFDVCESSDDGDR
ANLRACTSDGTLKDSEGGRRGRLLSSWSRAFVSIQEELVDDPLTYSPRPMTVVHMDQSMQ
LGPFRAVLRYLYTGQLDENEKELMHIAHIAELLEVFDLRMMVANILNNEAFMNQEITKAF
HVRRTNRVKECLAKGTFSDVVFKLDDGTIMAHKPLLISSCDWMAAMFGGPFVESCTKEVL
FPNTTRSCMRAVLEYLYTGRFCSRPDLDAMELIVLANRLCLPHLVALTELYTVTVLTEAA
MMGADIDGDVLVYLDMAQFHGAQQLTGWCLHHICTNYNSVCRKFPRDMKAKSTDYSDAEN
QEYFEKHRWPPVWYLKEDDHYQRARKERDKEDYLYQRRQCKRKWLFWNLPSSPNSNSPSS
GSSAVI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggagccctgctttttatctcgtccatcgaccaacccgatgcagcacttccttatgttg
cggtcccagctgacggattctgatatggactatgagaggccaaacgttgaaactatcaag
tgtgtggtggtaggagacaatgcagttggaaagacccgccttatctgtgcccgggcctgc
aatgccacactgactcagtaccagttactcgctacacatgtgcccacagtttgggcaatt
gaccagtacagagtatgccaggaggtattagagcgctccagagatgtggtggatgacgtc
agtgtgtcccttcggctctgggatactttcggagaccatcataaggaccggcgttttgca
tatggcaggtctgacgtggtggttctgtgcttctcaatcgccaatcccaactctctgtac
catgtgaagaccatgtggtaccctgagatcaagcacttctgtccccgtgctcctgtcatc
ctagtgggctgtcagctggacctgcgctatgctgacctggaggcagtgaatagggcacgg
aggcctttagctagacccattaaatcaaatgagattcttccaccagagagaggccgggag
gtggccaaagagttgggagtgccatattatgaaaccagtgttgttgctcaatttggagtc
aaggacgtctttgataatgctatccgagctgcgctcatctcacgccgccacctgcagttt
tggaaatctcacctcagaaatgtgcagcggcctctccttcaggcgcccttcctgccaccg
aaacctcccccgcctataatcactgtgcctcctccaccaaccaccacagaggagcatcca
gtcggcctcctggaggacccacactgtgctgatgtcatcctggttttgcaggagcgacag
aaaatctttgcacacaagatatacttggcaacatcctcttcaaagttctatgacctcttt
atcatggacacacaaaatgaggagactgagaggccccctcgtggtcctctttctggccga
gagctgctgatgcgtgctgctagctttgatgtttgcgagagcagcgatgacggagacagg
gccaacctgagggcctgcactagcgacggaaccttgaaggactccgaggggggccggcgt
ggcagactgctctcgtcgtggagccgagccttcgtcagcatccaggaggaattggtagat
gaccctctgacgtacagccccaggcccatgactgtagtgcacatggaccagtccatgcag
cttggtcctttccgagcagtacttcgctacctgtacacaggtcagctagatgagaatgag
aaagagctaatgcacattgcacacattgctgagctgctggaggtctttgacctgcggatg
atggtggcaaacatacttaacaacgaagccttcatgaatcaagaaatcaccaaagccttc
catgtacggcgcacaaacagagtcaaagagtgcttggctaaaggcaccttttctgatgta
gtattcaagctagatgatggaacgatcatggcccacaagcctttactcatctctagttgt
gactggatggcagctatgtttggcgggccttttgtggagagctgcaccaaagaggtgctg
tttcccaacacaactcgcagctgtatgagggctgtgctagaatatctctatacggggcgg
ttttgttctcggcctgacttggatgcaatggagcttattgttcttgccaatcgtctttgc
ctcccccacctggttgcacttacagaactttacacagtaacagtattgacagaggcagca
atgatgggggctgacattgatggagatgtgctggtgtacttggatatggcccagttccat
ggtgcccagcagctcactggttggtgtctccaccacatctgcaccaactacaacagtgtc
tgccgcaagtttccccgagacatgaaggccaagtctacagattattctgatgcagagaac
caagagtactttgagaagcatcgctggccacctgtgtggtatcttaaggaggatgaccac
taccaaagagcacgcaaagagcgtgacaaggaggactacctgtatcagagacggcaatgc
aaacgcaagtggctcttctggaaccttccttcctcgcctaactcaaactctccttcctct
ggctcgtccgctgtcatctga
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