Lates calcarifer (barramundi perch): 108878503
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Entry
108878503 CDS
T04895
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108878503
Spliceosome [BR:
lcf03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
108878503
Other components
Complex C specific factors
108878503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
108878503
NCBI-ProteinID:
XP_018524790
UniProt:
A0A4W6GAQ4
LinkDB
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Position
LG13:11123063..11128129
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AA seq
834 aa
AA seq
DB search
MSMSHLYGRRGGEEEEEGVEIESFEVTDWDLANEFNPERRRHRQTKEQATYGIWADRDSD
EDERPSFGGKRSKDYTAPVNFVSAGLRKTAAEEKQQLKGEGGSDDSDGAPSAPSPPRATA
PKKLQMGNFRGNQSQRFAGGIQSGQGIGSWEKHTKGIGQKLLQKMGYQPGKGLGKNAQGI
VNPIEAKVRKGKGAVGAYGNERTQQSLKDFPVIDSDEEEEKEFQKELGQWRKDPAGSAAK
KKPKYSYRTVDELKAKGKLAGRSTAASAGELAQVKVIDMTGREQKVYYSYSQMSNKHSVP
DEGPPSMSTRDQKGSGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLSHESRA
LQSRLDAEQDSIQRMEAVLALVERFPSGETAPGEGPTLQECARIFETLQTDYYEEYKTMG
LADLAVAVVHPLLKEKLCSWDPLKDSSYCLEDIGQWRAILESRNLHSSAPDSNMDPYHRL
LWEVWIPVMRSCVSGWQPRMVGPMVDCVDVWAPLLPPWILDHLLEQLILPRLQREVDNWN
PLTDTVPIHSWIHPWLPLLQSRLEPLYPPIRSKLSNALQRWHPSDTSARLILQPWKDVFT
PGAWEAFMVKNIIPKLALCLEELVINPHQQQMEPFHWVMDWEGMLSPSSLVSLLDKNFFT
KWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDVLLAQPLIKEKFNEALDIMNRAVSSGMG
GYMQPGARENIAYLTQTERRKDFQYEAMQERRDAESVAHRGISAGVPTNFKDLIQTKAEE
NNIVFMPLVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccacctgtatggtcggagaggaggggaggaagaggaggaaggtgtggag
attgaaagctttgaggtgacggactgggacctcgccaatgagttcaaccccgaacgccgc
agacacaggcagaccaaagagcaggccacctatggtatctgggctgatagggactcggat
gaggatgagagaccaagttttggaggcaagagatctaaagactacacagctccagtaaac
tttgttagtgctggtctgcgtaagactgcagctgaggagaaacagcagctaaaaggagaa
ggaggctctgatgactctgatggtgctccgtcagcaccttcccctccacgcgctactgca
cccaaaaaactccagatgggaaatttccgtgggaaccagtcacagaggtttgcaggtggc
atacagtctggacaaggcattggtagctgggagaaacacacaaaggggattggacagaag
cttctacagaaaatgggctaccagccaggcaaaggcttgggcaagaatgctcaaggtatt
gtaaatcctattgaggcaaaagttcgtaaaggcaagggagcagtgggtgcttatggcaac
gagcgaacccagcagagtctcaaggattttcctgtgatcgactcagacgaagaagaggaa
aaggaatttcagaaggagctcggccagtggcgtaaggatccggcagggtctgcagcaaag
aagaaacccaagtactcctacagaactgtagacgagctgaaggctaaagggaaactggca
gggcggagcacagcagcatccgctggagagctggcacaggtcaaggtaatagacatgact
ggaagagagcaaaaggtatactacagttacagtcagatgtccaacaagcacagcgtccca
gatgaaggtccaccaagcatgtccactcgggatcagaaaggatctggctttgctctgcct
gagctcgaacacaacctgcagctactgatagaccttacagaacaggacatattacagtct
gccagacgtctgcagcatgaaaaagatgtagtcgtgtctctgagccacgagtcgcgagca
ctgcagagcagactggatgcagagcaagactccattcagagaatggaggctgtgttggca
ctggttgagcgttttccttctggggagacagcacctggggagggacccaccctgcaggag
tgtgcccggatctttgagaccttacaaacagactattatgaagaatacaagacaatggga
ttggcagacttggctgtagctgttgttcatccattactcaaagagaaactttgttcctgg
gatccactgaaggacagctcttattgtctggaggacatcggtcagtggagagcaatcctt
gaatctagaaacctccattccagtgctccagattcaaacatggacccttaccacagactg
ttgtgggaagtgtggatcccagtgatgcggtcctgtgtgtcaggctggcagcctcgaatg
gtcgggccaatggtggactgtgtggatgtctgggctccccttctccccccgtggatccta
gatcaccttttggagcagctgatcttaccccggctacagcgagaggtggataactggaac
ccgttaactgacactgtgcccatccactcctggatccacccctggctgcctctgctgcag
tcacgtctagagcctctgtacccgcccatcaggagcaaactgtccaacgcactgcaacgg
tggcaccccagtgacacgtcagcccgcctcatcctgcaaccgtggaaagatgttttcacg
ccaggtgcatgggaggccttcatggtgaaaaacatcatccctaaactggctttgtgtctg
gaagagctggttatcaaccctcaccagcagcagatggagccatttcactgggtgatggac
tgggagggcatgctgtccccctccagccttgtgtccctgctggacaaaaacttctttaca
aagtggttgcaggtgctgtgttcatggttgagtaacagtcctaactatgaggaaatcact
aaatggtacctcggctggaaaagcatgttcagtgacgtattgttggcacagccactcata
aaggagaaattcaatgaagctttggatatcatgaaccgggcagtgtcctcaggcatgggt
ggatatatgcaacctggtgcaagggagaacattgcatatctcacacagacagagagacga
aaggacttccagtatgaagcgatgcaggagcgcagggatgccgagagcgtggctcacagg
ggcatcagcgctggcgtgccaactaacttcaaagatctcattcagaccaaggcagaggag
aacaacattgtctttatgcccttagtggccaaacggcacgagggcaaacagctgtacaca
tttgggcgcattgtcatctacatagacaggggggttgtgtttgtgcaaggagagaaaacc
tgggtgcccacgtctttgcagagtctgatagatatggccaagtga
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