KEGG   Lates calcarifer (barramundi perch): 108878503
Entry
108878503         CDS       T04895                                 
Name
(RefSeq) tuftelin-interacting protein 11
  KO
K13103  tuftelin-interacting protein 11
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcf03041]
    108878503
Spliceosome [BR:lcf03041]
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    108878503
  Other components
   Complex C specific factors
    108878503
SSDB
Motif
Pfam: GCFC TIP_N G-patch G-patch_2
Other DBs
NCBI-GeneID: 108878503
NCBI-ProteinID: XP_018524790
UniProt: A0A4W6GAQ4
LinkDB
Position
LG13:11123063..11128129
AA seq 834 aa
MSMSHLYGRRGGEEEEEGVEIESFEVTDWDLANEFNPERRRHRQTKEQATYGIWADRDSD
EDERPSFGGKRSKDYTAPVNFVSAGLRKTAAEEKQQLKGEGGSDDSDGAPSAPSPPRATA
PKKLQMGNFRGNQSQRFAGGIQSGQGIGSWEKHTKGIGQKLLQKMGYQPGKGLGKNAQGI
VNPIEAKVRKGKGAVGAYGNERTQQSLKDFPVIDSDEEEEKEFQKELGQWRKDPAGSAAK
KKPKYSYRTVDELKAKGKLAGRSTAASAGELAQVKVIDMTGREQKVYYSYSQMSNKHSVP
DEGPPSMSTRDQKGSGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLSHESRA
LQSRLDAEQDSIQRMEAVLALVERFPSGETAPGEGPTLQECARIFETLQTDYYEEYKTMG
LADLAVAVVHPLLKEKLCSWDPLKDSSYCLEDIGQWRAILESRNLHSSAPDSNMDPYHRL
LWEVWIPVMRSCVSGWQPRMVGPMVDCVDVWAPLLPPWILDHLLEQLILPRLQREVDNWN
PLTDTVPIHSWIHPWLPLLQSRLEPLYPPIRSKLSNALQRWHPSDTSARLILQPWKDVFT
PGAWEAFMVKNIIPKLALCLEELVINPHQQQMEPFHWVMDWEGMLSPSSLVSLLDKNFFT
KWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDVLLAQPLIKEKFNEALDIMNRAVSSGMG
GYMQPGARENIAYLTQTERRKDFQYEAMQERRDAESVAHRGISAGVPTNFKDLIQTKAEE
NNIVFMPLVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq 2505 nt   +upstreamnt  +downstreamnt
atgtctatgtcccacctgtatggtcggagaggaggggaggaagaggaggaaggtgtggag
attgaaagctttgaggtgacggactgggacctcgccaatgagttcaaccccgaacgccgc
agacacaggcagaccaaagagcaggccacctatggtatctgggctgatagggactcggat
gaggatgagagaccaagttttggaggcaagagatctaaagactacacagctccagtaaac
tttgttagtgctggtctgcgtaagactgcagctgaggagaaacagcagctaaaaggagaa
ggaggctctgatgactctgatggtgctccgtcagcaccttcccctccacgcgctactgca
cccaaaaaactccagatgggaaatttccgtgggaaccagtcacagaggtttgcaggtggc
atacagtctggacaaggcattggtagctgggagaaacacacaaaggggattggacagaag
cttctacagaaaatgggctaccagccaggcaaaggcttgggcaagaatgctcaaggtatt
gtaaatcctattgaggcaaaagttcgtaaaggcaagggagcagtgggtgcttatggcaac
gagcgaacccagcagagtctcaaggattttcctgtgatcgactcagacgaagaagaggaa
aaggaatttcagaaggagctcggccagtggcgtaaggatccggcagggtctgcagcaaag
aagaaacccaagtactcctacagaactgtagacgagctgaaggctaaagggaaactggca
gggcggagcacagcagcatccgctggagagctggcacaggtcaaggtaatagacatgact
ggaagagagcaaaaggtatactacagttacagtcagatgtccaacaagcacagcgtccca
gatgaaggtccaccaagcatgtccactcgggatcagaaaggatctggctttgctctgcct
gagctcgaacacaacctgcagctactgatagaccttacagaacaggacatattacagtct
gccagacgtctgcagcatgaaaaagatgtagtcgtgtctctgagccacgagtcgcgagca
ctgcagagcagactggatgcagagcaagactccattcagagaatggaggctgtgttggca
ctggttgagcgttttccttctggggagacagcacctggggagggacccaccctgcaggag
tgtgcccggatctttgagaccttacaaacagactattatgaagaatacaagacaatggga
ttggcagacttggctgtagctgttgttcatccattactcaaagagaaactttgttcctgg
gatccactgaaggacagctcttattgtctggaggacatcggtcagtggagagcaatcctt
gaatctagaaacctccattccagtgctccagattcaaacatggacccttaccacagactg
ttgtgggaagtgtggatcccagtgatgcggtcctgtgtgtcaggctggcagcctcgaatg
gtcgggccaatggtggactgtgtggatgtctgggctccccttctccccccgtggatccta
gatcaccttttggagcagctgatcttaccccggctacagcgagaggtggataactggaac
ccgttaactgacactgtgcccatccactcctggatccacccctggctgcctctgctgcag
tcacgtctagagcctctgtacccgcccatcaggagcaaactgtccaacgcactgcaacgg
tggcaccccagtgacacgtcagcccgcctcatcctgcaaccgtggaaagatgttttcacg
ccaggtgcatgggaggccttcatggtgaaaaacatcatccctaaactggctttgtgtctg
gaagagctggttatcaaccctcaccagcagcagatggagccatttcactgggtgatggac
tgggagggcatgctgtccccctccagccttgtgtccctgctggacaaaaacttctttaca
aagtggttgcaggtgctgtgttcatggttgagtaacagtcctaactatgaggaaatcact
aaatggtacctcggctggaaaagcatgttcagtgacgtattgttggcacagccactcata
aaggagaaattcaatgaagctttggatatcatgaaccgggcagtgtcctcaggcatgggt
ggatatatgcaacctggtgcaagggagaacattgcatatctcacacagacagagagacga
aaggacttccagtatgaagcgatgcaggagcgcagggatgccgagagcgtggctcacagg
ggcatcagcgctggcgtgccaactaacttcaaagatctcattcagaccaaggcagaggag
aacaacattgtctttatgcccttagtggccaaacggcacgagggcaaacagctgtacaca
tttgggcgcattgtcatctacatagacaggggggttgtgtttgtgcaaggagagaaaacc
tgggtgcccacgtctttgcagagtctgatagatatggccaagtga

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