Lates calcarifer (barramundi perch): 108878509
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Entry
108878509 CDS
T04895
Name
(RefSeq) piwi-like protein 2 isoform X1
KO
K02156
aubergine
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108878509
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108878509
piRNA pathway
108878509
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
Piwi_N
PAZ
ArgoL1
ArgoN
ArgoL2
Motif
Other DBs
NCBI-GeneID:
108878509
NCBI-ProteinID:
XP_018524806
UniProt:
A0A4W6EX50
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Position
LG13:complement(17695979..17710692)
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AA seq
1062 aa
AA seq
DB search
MDPELPTDLSGMTGVPWLGRGRGLQPEELDVGRSRGLLLSTEGPGVGRARGFPTPGDTPQ
GQGVTVSITEPALGRARGLLLQSGDGGVGQARGLLFPTAEPKIGVARGAILPSLEPQHGQ
TPPFETTTRDLTEETAALPTKEVDKPTHGQGLTLVSMFRGMGIEPSLTSWGRGTLPVGRG
AAGDVGETKLQGTQEIISQTEEVMGRGSSFHGQSLSQLMAVGLGRSAMPQLGVGRGCPLL
PSFPPGRVGSVSPASEPQPVIYSQPSCAAAMPPVPTTQDVLELSTVAPAQRELQMEAVRE
PISKAGKKGAPITIGSNHIPIHCKNEAVYQYHVTFTPNVESMPMRFGMMKDHRSTTGDVV
AFDGSILYLPVKLNDVVVLKSLRRTDDEEIQIKIQMTKILPPNSDLCIPFYNVVLRRVMK
IIGLKLVGRNHYDPESAVILGKHRLQVWPGYSTCIKRTDGGLFLCVDVSHKVLRNDSVLD
VMNMLYQQSKENFQDECTKELIGSIVITRYNNRTYRIDAIEWNKSPKDTFPLMDGTKTTF
VEYYSKNYGITIKEMDQPLLMHRPKERSKPGGKQIITGEILLVPELSFMTGIPEKMRKDF
RAMKDLTMHINVSGEQHTHSIKQLLKNIRANPESLKELSRWGLEIGSEILMVKGRALPLE
TICLQSSSFATGADVSWSREVVRDASISSIPLNIWAVFYPRRCAEQAEELVSTFKKVAGP
IGVRLERPIRVELRDDRTETYVKSIHSQLTSEPNMQLIVCIIVGNRDDLYSAIKKLCCIK
SPIPSQVINIRTISQQQKLKSVAQKILLQINSKLGGELWTVSVPLKHLMVVGVDVHHNTS
KAHQSVMGFVASVNSSLTRWYSRVTFQTPNEELINGFRVCLLAALQKYYEVNHNLPEKIV
VYRDGVSDGQLKMVEQYEIPQLIKCFETFPGYEPKLVFIVVQKRISTTLYSWTSNSIGTP
PPGTVLDHTLTQREWVDFYLMAHHIRQGCGLPTHYISLYNTANLTPDHLQRLTFKMCHLY
WNWPGTIRVPAPCKYAHKLAFLSGQYLHSEPAVQLSDKLFFL
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggatccagagcttcctactgaccttagtggcatgacgggcgttccctggctgggacga
ggaagaggactgcagccagaagagttagatgtaggacgtagtagagggctgctgctctct
acagaaggacctggtgtaggacgagccagaggtttccccactcctggcgataccccacaa
ggacaaggagtaaccgtgtccattacagaacctgcgcttggacgagccagaggactgctg
ttgcagtctggtgatggaggagttggacaggccagaggactgctcttcccaacagctgaa
ccaaagataggggtagcaagaggtgctattctgcctagtctggagccacagcacggacag
acacctccatttgaaactacaacacgagacctgacggaggagactgcggctctgccaaca
aaagaggttgacaagcctacccatggtcaaggtttaacattggtctccatgttcagagga
atgggcattgagccctcactgacttcatggggaagaggaacactgccagttgggagggga
gcagccggcgacgtgggagagacaaagctgcaaggtacccaagagattatcagccaaact
gaagaggtgatgggacgaggcagcagtttccatggccaaagtttgtcccagctgatggca
gtggggcttgggagatcagcaatgccacagcttggagtaggaagagggtgccctttactt
ccttcttttcctccaggtcgtgttgggtcagtttctcctgcctctgaaccgcaaccagtc
atatattctcagccttcctgtgcagcagccatgccccctgtgcccactactcaagatgtc
ctggagctttctactgttgcaccagcacagagagagctgcaaatggaggcagtgcgtgag
ccaatcagtaaggctggaaaaaaaggagctcctataactattggctcaaaccacatcccg
attcactgcaagaacgaagctgtttatcagtaccatgttacattcactccaaatgttgaa
tcaatgccaatgcgtttcgggatgatgaaagatcaccgctcgaccacgggggacgtagtg
gcttttgatggctccatactctacctgcctgtcaagctgaatgacgtggttgttctcaag
agtttgagacggaccgatgatgaggaaatacaaatcaaaatccagatgacgaagattttg
ccacccaactcagatctatgcattcccttctacaatgtggtgctcaggagggtaatgaaa
atcattggactgaagctggtaggacgaaatcactatgatccagagagcgcagtcattctt
ggaaaacatcggcttcaagtgtggccaggctattcaacttgtatcaagcgaacagatgga
gggctgttcctatgtgtggatgtgtctcacaaagtcttgcggaatgactctgtgctggat
gtcatgaacatgttgtaccaacagagcaaggagaacttccaagatgaatgcaccaaagaa
ctgatcggcagcatcgtcatcacccgctacaacaaccgcacctaccgcattgatgccatt
gaatggaacaagtcccctaaagacaccttcccattgatggatggcacaaaaaccaccttt
gtggaatactacagcaagaactatgggattacaatcaaagagatggaccaacctctgctc
atgcatcggccgaaggagaggtccaagccaggaggaaagcaaatcattactggagagatc
cttttagtgccagagctttccttcatgacaggaatccctgaaaaaatgaggaaggacttc
agagctatgaaggatctgaccatgcacatcaatgtgagcggtgagcagcacacccactca
ataaagcagcttctgaagaacatcagagccaaccctgagagtctgaaagagctcagccga
tggggactggagattggctcagagatactaatggttaaaggtagagctctgccccttgaa
accatctgcctgcagtcctcctcatttgccactggtgctgatgtatcctggtccagagag
gttgtcagggatgcatcaatcagttctatccctttgaacatctgggccgtcttctaccct
cgccgctgtgcagagcaggctgaggagctggtttccacttttaaaaaggtggccgggcct
attggggttcgactggagcgacccattcgagtggagctgagggacgatcgtactgagact
tatgtcaagagcatccactctcagctcaccagtgaacccaacatgcagctcatagtgtgc
atcattgttggcaacagagacgacctctacagtgccatcaagaagctttgctgcattaaa
agtccaatcccatcccaggtcatcaatatccggacaatttcccagcaacagaaattgaag
agtgttgcccaaaagatactcctgcagatcaacagcaagttaggaggagagctgtggaca
gtcagcgtccctctgaaacacttgatggtggttggcgttgatgtccaccacaacaccagc
aaggcgcatcagtcagtcatgggctttgtcgcaagtgtgaacagctcactgacacgctgg
tactccagagtaactttccaaacacccaatgaagaactaatcaatggcttcagagtgtgc
ttactggctgcactgcagaagtactacgaggtgaaccacaacttgcctgagaaaattgtg
gtgtatcgggatggagtgtcagatggccagctgaagatggtggagcagtacgagatccca
cagttaatcaaatgttttgagacattccctggctatgagcccaagctggtcttcattgtg
gtccaaaaacgcatcagcaccaccctctactcctggacttcaaacagcattggtactcct
ccacctggaactgttctggatcacaccctcactcagagagaatgggtggacttctatctg
atggcacatcacattcgccagggctgtggactccctacacattacatctctttgtacaac
acagcaaacctcacaccagaccatttgcaaaggctgacattcaagatgtgccatttgtac
tggaactggccaggcaccattcgtgttccagcaccatgcaaatatgcccacaaactggct
ttcctgtctggccagtacctgcactcagagccagccgtccagctgtcagacaagctcttt
ttcctttga
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integrated database retrieval system