Lates calcarifer (barramundi perch): 108878514
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Entry
108878514 CDS
T04895
Name
(RefSeq) semaphorin-4C
KO
K06521
semaphorin 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108878514
CD molecules [BR:
lcf04090
]
Proteins
108878514
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Ig_2
Paramecium_SA
Motif
Other DBs
NCBI-GeneID:
108878514
NCBI-ProteinID:
XP_018524814
UniProt:
A0A4W6EPM8
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Position
LG13:19022400..19112282
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AA seq
868 aa
AA seq
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MGTDMRAMGGTKVLLLVILVGWEKSLGLNWNPVPRKTVRYQDVLDSMARFSVQGVFNYSM
LTLSDHERVLYVGAREALFALDPNDISRQLRPQIDWPAPQDKKRECVAKGKNNQTECFNY
IRFLQSYNHTHLYTCGTYAFQPKCTYVNADYFALNTGALEDGKGKCPYDPAKGHTGLIVD
KELYSATLNNFLGTEPVILRNLGQQHYSMKSEYLPAWLNEPDFVGSALVRESSGSKEGDD
DKIYFFFSERALELECDTELTVARVARVCKGDLGGTRTLQKKWTTFQKARLECSLPERHV
SFNNLRAVFTLPGQDWRGTTFYGIFHAQWGDVDVSAVCQYQISDVKKVFEGSYKEYREAS
QRWGRYTGAVPVPRPGSCITNSDRENGYNSSLQLPDATLNFAKKHPLMEDKALARPLLLT
KGVNFTRLAVDRVSALDQRAYNMLFIGTAEGWLQRVVILGSEAHVIEEIQLFETAQPVDS
LTISHSKKYLYIGSRSEVLQLPLANCSRYQSQPDCLLARDPYCAWDSEGRACVRIDLHRG
STSSLSQDLMLERFSRGKAKFDKPVSIPSPEHSRLRNVTVVVGSDMVLPCQLVSNLAQPC
WVLNDRELQLGDPEAGGPRFDRTLKALVIPEAGQMQAGRYICYSEEQGVKFQTERYQVAV
VASAPVFMEARAPDSSMGLFWVLVITLGAACLLLLVAALYLRRRLKLALGKGADMKPLES
TLVYPITLPKEPPTFVPSKMPSDEDRFWETGANYYYSDGSLKIVPGHALGPSSVSSTASP
SAIPGQPIHSPSRLSLTNIRGSGSNGYIRLNLSTAGEERASGAGAGGGGLGGLGMGGNDY
SSPFKEELRRTLQQRSVLPDANPEESSV
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgggcactgacatgagagccatgggcgggaccaaggtcttgctcctggtgattctggtt
ggatgggagaagtcgctgggtctgaactggaacccagtcccacgcaagactgttcgatac
caggatgtgttggacagcatggcgaggttcagtgttcaaggagtgttcaactacagcatg
ctgactctatccgaccatgagcgggtcttgtatgtcggagcacgggaggcgttgtttgcc
ctggaccccaacgacattagtaggcagctacggccacagattgactggccggctccacag
gacaagaagagagagtgtgtcgccaaggggaagaacaaccagaccgagtgcttcaactat
atccgcttcctgcagagttacaatcatacgcacctctacacctgcggcacctacgccttc
cagcccaaatgcacctatgtgaatgcagactattttgccctcaatactggagccttagaa
gatgggaagggcaaatgcccatatgaccctgccaaggggcacactggcttgatagtggat
aaggagctatactcagcaacacttaacaacttcctgggtacagaaccagtcattctgagg
aacctgggccaacagcactacagcatgaagagtgaatacttgcctgcctggctcaacgaa
cctgactttgtgggttcagccctggtgagggagagcagcggcagtaaagagggggatgac
gacaagatctacttcttcttcagtgagcgagcgttggagctggagtgtgacacagagctc
accgtggccagagtggcccgcgtctgcaagggagatctgggtggtaccaggaccctgcag
aagaagtggaccacattccagaaagcccggctggagtgctccctcccagagcgtcacgtc
tccttcaacaacctgagggctgtcttcacactgccagggcaggactggcgggggaccact
ttctatggcatcttccatgcccagtggggtgacgtggatgtgtcagctgtgtgccagtac
cagatctctgatgtgaagaaagtgtttgaaggatcctacaaagagtacagggaggcgtct
cagaggtggggacgctacactggtgctgtccctgtcccacggcctggatcgtgtataact
aactcagacagggagaatggctacaacagctctctgcagctgcctgatgccacgctcaac
tttgccaagaagcacccgctgatggaggacaaagctctggctcgccccctgctgctcacc
aagggcgtcaacttcaccaggctggcagtagatcgggttagcgccctggaccagcgggca
tacaacatgctctttatcggcacagcggagggctggctgcagagagtggtgatcctcggc
tccgaggcccatgtgatagaagagatccagctgtttgagaccgcccagccagtggacagc
ctgaccatctcccactccaagaagtacttgtacatcggctctcgttcagaagttctccag
ctgcccttggccaactgcagccgctatcagtctcagccagactgtctgctcgcccgggac
ccctattgcgcttgggacagcgagggtcgggcctgcgtccgcatcgacctccaccgcggg
tccacctcctccctgtcacaggacctcatgctggaaaggttcagccggggaaaagcgaag
ttcgataagcccgtctccatccctagccctgagcactcccgtctcaggaatgtaacagtg
gtggtgggatctgacatggtgctgccttgccagctggtctccaacctggctcagccctgc
tgggttctcaatgaccgtgagctacagctgggagaccccgaggccggagggccgcgcttt
gaccggaccctcaaagcccttgtcatccctgaagcgggccagatgcaagctggccgctat
atctgctactctgaggagcaaggggtcaagtttcagacagagcgctaccaggtggctgtg
gtagccagcgctccagtcttcatggaggcccgggctccagacagcagcatggggctgttc
tgggtgctggtcatcactcttggagcggcatgcctgctgctcctcgtagcagctctttac
ctgcgcaggaggctgaagctggccctaggaaaaggagctgacatgaagcctctggagagc
acccttgtgtaccccatcactctgcccaaggagccacccacctttgtgcccagcaagatg
cccagcgatgaggaccgcttctgggaaacaggtgccaactactactactcagacggctca
ctgaagatcgttcccggtcatgccctggggcccagcagcgtcagcagcacggcgtcgccc
agcgccattcccggccagcccatccactcccccagccgtctcagccttaccaacatccga
ggctctggtagcaatggctacatccgcctcaacctgagcacagcaggggaggagagggct
agcggtgctggcgctgggggcggcgggctgggaggcctaggcatgggcgggaatgactac
tccagccccttcaaggaggagctgagacgcactctgcagcagagaagtgtgctgcccgat
gcgaaccccgaggagtcgtccgtctag
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