Lates calcarifer (barramundi perch): 108878521
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Entry
108878521 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: ras and EF-hand domain-containing protein
KO
K17199
Ras and EF-hand domain-containing protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
lcf04031
]
108878521
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108878521
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rab Family
Rab45
108878521
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
EF-hand domain-containing proteins
Other EF-hand domain-containing proteins
108878521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
MMR_HSR1
EF-hand_8
GTP_EFTU
TSC22
EF-hand_11
INO80E
SOGA
Motif
Other DBs
NCBI-GeneID:
108878521
NCBI-ProteinID:
XP_018524833
UniProt:
A0AAJ7PH99
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All DBs
Position
LG13:complement(8267784..8285442)
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AA seq
709 aa
AA seq
DB search
MSAEEQDRLRSLFHAYDVDNSGRIERNEFLTICAELQVSAAEADRIFNRLDVDNDGTVTL
LEFISGFHDRYGEYMESDGGDVSVAWENFETRLGEQAKFIPRHEQAATLYQNISLTEPRL
IPQFEKVILNFTKEIKQQNSEMENLALAIKRAQDQASMQLSEMEEEMDQRIHAAERKTRE
QEKKRTEAALNELRRNYETEVCELQCKIQRMQMIEEKYKNITVKDESPALKKKINELMLE
NQRLKQELLKSQTKVACLQSDMDSLKTELTDQSINSERDEELMKHFSDERDILESQIEIL
QTANRKLHDSNDGLRAALERITRSGNAGSGDIKDRNRSKSICYTSPYALMDRFSQRMDDF
PLYTRRPSCDTLALAMCDPGLRRRHSSECEVDSLPEVYMDSGLSTLRGSHGGYDSEQDVK
GQEEEEEEEEEREEKKGEDDNNDSMIGENSDTEPAETQDGESAFGSDSSSVLDWKPTEPI
SVTPAPTTRKALSAISVQKDDKDSVDLGYMTSEKAYRIVLAGDAAVGKSSFLLRLCKNEF
KLSSSATLGVDFQMKTLIVDGEPVLLQLWDTAGQERFRSIAKSYFRRADGVLLLYDVTCE
KSFLNVREWVDMIEDVSQEDIPIMLVGNKCDLRQHGSNCIPTSYGEKLAMTYNTLFCETS
AKDGSNILEAVLHLARLVTKQATFDEKSHYQSLPNLGAPKKKPNFTCCT
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagaggagcaggacaggctgcgctccctctttcacgcctacgacgtggacaac
tccgggcggatcgagagaaacgagttcctcaccatctgtgcggagctgcaggtttccgcg
gcagaggcggaccgtatatttaaccggctggacgtcgataacgacggaaccgtcaccctg
ctggagttcatcagcggcttccacgaccgctacggagagtacatggagtcggacggggga
gatgtgtccgtagcctgggagaacttcgagacgaggctgggcgagcaggccaagttcatc
cccaggcatgaacaagctgcgacattgtaccagaacatcagtctgactgagccccgactg
attcctcagtttgaaaaagtcatcttaaacttcaccaaagagatcaaacagcaaaactca
gagatggagaacctggctctcgccattaaacgagcgcaggaccaggcatcgatgcagctc
agtgagatggaggaagagatggaccaacgcattcatgctgcggagagaaaaacacgggag
caggagaagaagcgaacagaggccgcgctgaacgagttacgaagaaactatgaaactgaa
gtgtgtgagcttcagtgtaagatccagaggatgcagatgatagaagagaagtacaagaac
atcactgtgaaagacgagagcccagcgctgaagaagaagatcaatgagctgatgctggag
aatcagcgattaaaacaggagctgttgaaatctcagaccaaagtcgcctgtctgcagagt
gacatggactcactgaagacagagttaactgatcaaagcatcaactctgaacgagatgag
gagctcatgaaacatttctctgatgagcgagacatcctggagagtcagatcgagattctg
cagacagccaacaggaagctccatgacagcaatgatggtctgagggccgctctggagagg
atcacaaggtctggtaacgctggctcaggagatataaaggacagaaacagaagtaaaagc
atctgctacacatcaccatatgctttaatggacaggttctcccaacgtatggatgatttc
cctctatacacccgccggcccagctgtgacactctggccttagccatgtgtgatccaggc
ctgaggcgcagacacagcagtgagtgcgaggtggacagcctgccggaggtctacatggac
agtggtctgtcaacactcagaggctcgcatggaggctacgactctgagcaggatgtcaaa
gggcaggaagaagaggaggaggaagaggaagagagagaggagaagaaaggggaggatgac
aacaatgatagcatgattggagaaaactctgacactgagccagcagagacacaggatggt
gagtcggcatttgggtcggacagcagctcagtactagactggaagcctactgaacccatt
agtgtcactccagccccaacaacacgaaaagccctcagtgccatcagcgttcagaaagac
gacaaggatagcgttgacctgggctacatgacatcagagaaggcctacagaatcgtgttg
gctggagacgctgctgtaggaaagtccagcttcctgctgcgcctctgcaagaacgaattc
aaactaagctccagtgctactctgggagtggatttccagatgaagacactaattgtagat
ggagagcctgttttactacaactgtgggacactgcaggacaggaaagatttcgcagtatt
gcaaagtcttatttccgtcgggcggacggcgtgttgctgctgtacgatgtcacctgtgaa
aagagcttcctcaatgttagagagtgggtggacatgattgaggatgtgtctcaggaggat
attccaatcatgcttgtgggtaataaatgtgatctcagacaacatggatctaactgtatt
cctaccagctatggagaaaaactagccatgacatacaacactctgttctgtgaaactagc
gccaaagatggttccaacatccttgaggctgtgctgcacctggccaggctggtaacaaaa
caggccacctttgatgaaaagagtcattatcagtcactgcccaacttgggtgcgcccaag
aaaaaaccaaacttcacctgctgcacttga
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