Lates calcarifer (barramundi perch): 108878586
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Entry
108878586 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: zinc phosphodiesterase ELAC protein 1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108878586
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
108878586
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
108878586
Prokaryotic type
108878586
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Crystall
Motif
Other DBs
NCBI-GeneID:
108878586
NCBI-ProteinID:
XP_018524964
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All DBs
Position
LG13:complement(7376421..7380042)
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AA seq
370 aa
AA seq
DB search
MTMDMTFLGTGSAYPSPHRGASALVLRTEGECWLFDCGEGTQTQLMRSQLRAGRITKVFI
SHLHGDHLFGLPGLLCTVSLNTNPDPEKNLNCVDIYGPRGLRHFLRVTLGLSGSQLLFPY
AVHELEPTPEQSPEEGQLSLEMTAECGPLHPQERPGRTISLDVSSDCYLLFEDKKFVVKA
FRLFHRVPSFGFCIQEHDRPGRLKTELLKELGLKPGPLYGRLKAGETITLESGRVVLPSE
VLEETIPGRKVCILGDCSSVLGEGPLSLCRGADILVHEATLGNDHREKAVDHGHSTPEMA
AAVARACGAQRLVLYHFSQRYKPSSLQTEGDEDNISELKRQAEEALQDSGVEVTLAEDFL
TLTIPLRRPR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggatatgacttttctcgggaccggctcggcctacccgtctcctcaccgcggt
gcctcggctctggtgctgcggacggagggggagtgctggttgtttgactgcggagaggga
acccagacccaactgatgaggagccagctcagagccggccgaatcaccaaggttttcatc
tcccacttacatggagatcacctgtttggtctgcctggtctgctctgcactgtgagtctc
aacaccaaccctgacccagagaagaacctgaactgtgtggacatatatgggccccggggc
ctccgacactttctcagggtgacacttggcctctctgggtcacagctgctcttcccttac
gcagtgcatgagctggagcccacacctgagcagagtccagaggagggacagctcagtctg
gagatgaccgcagagtgcggtcctctgcacccacaggagcgaccaggcaggacaatctca
ctggatgtctccagtgactgttacctcctctttgaggacaagaagtttgtagtcaaagcc
ttcagattgttccatcgcgtcccctcgtttggtttttgcattcaggagcatgatcgccct
ggacgactgaaaactgaactactgaaggaactgggcctgaaaccggggcctctctatggc
cgtctcaaagctggagagaccataaccttggaaagcgggcgtgtggtgctgcctagtgag
gtgctggaagaaaccatcccagggaggaaagtctgcattttaggggactgtagctcagtt
cttggggaaggaccactgagtttgtgcagaggggcggacattctagttcatgaggcgact
ctgggcaacgatcaccgagagaaagcagtggaccatggacatagtacacctgagatggca
gcggcagtggctcgggcttgcggtgcgcagaggttagtgctataccacttcagtcagagg
tacaaacccagctccctgcagacagaaggagacgaggacaacatctcagagctcaagaga
caggctgaggaagctctgcaggacagtggtgtggaagtgactctggctgaggactttctg
actctgaccattcccctccgaagaccaaggtaa
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