Lates calcarifer (barramundi perch): 108878594
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Entry
108878594 CDS
T04895
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108878594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108878594
Spliceosome [BR:
lcf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
108878594
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GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
108878594
NCBI-ProteinID:
XP_018524968
UniProt:
A0A4W6GCI9
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Position
LG13:9870322..9875773
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AA seq
500 aa
AA seq
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MVSLKREREVDVDDDDSDDGVAAKIGRGRVVEDRRSRHCPYLDTINRSVLDFDFEKLCSI
SLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSL
EDITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFSNV
PPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLC
SKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKSSIITKAFQGSMRIFSKKLPHPDLPQ
EEKEALLMTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGSTE
KEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEE
AQATEKNTTYDLVANIVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVIDILPQMITLSEA
YIQIWKRQESDNDTNNHTGV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtttctctgaaacgagaaagagaagttgatgtggacgacgatgacagcgatgacggg
gtggcagccaaaataggacgagggcgtgtagtagaagaccgaagaagccgccattgccct
tatcttgacaccataaacaggagtgtgctggactttgactttgagaagctctgctccatc
tctctctcccacatcaacgtctacgcctgccttatatgtgggaaatactttcaaggtaga
ggtcttaagtcccatgcctacactcacagtgtacaatttacccatcacgtgttcctcaat
ctgcacactctcaagttttactgtctgccagacaactatgagatcattgactcttcacta
gaagacatcacttatgtgctaaagccaactttcaccaagcagcacatcgcagggctggac
aagcagggtaaactgtaccgcgcttacgatggtacgacatacctgccaggcattgtcggg
ctcaacaacatcaaagccaatgactacgctaatgtggtgttacaggctttttccaatgtt
ccacctttgcgaaactacttcctggaagaggaaaactatagaggaatccgcaggccaccg
ggggacatcatgttcctcttggtgcagaggtttggtgagctgatgcgaaaactctggaat
ccaagaaacttcaaggcccacgtgtctccccatgagatgctgcaggctgtggtgctgtgc
agcaagaagaacttccaaattactaagcaaggagatgctgtggacttcatgacatggttc
ttgaatgctctgcatggtgctttgggaggcacaaagaaaaaatcatcaatcattacaaaa
gcatttcaaggctccatgcggatcttctccaagaaacttccacaccctgatttaccacaa
gaggagaaagaggcattgcttatgacagaagagtaccaggaacagatgtctgagtccacc
ttcctgtttctgacacttgacctcccaacagctccactgtacaaggatgagaaggagcag
cttatcatcccgcaggtccctctcttcaacatcctgggaaagttcaatggtagcacagag
aaggaatacaaaacctacaaagagaattttctcaaaaggttccagctgaccaaactgcca
ccgtacctcattttttgcatcaaaagattcaccaagaacaacttctttgtggaaaagaat
ccaacgattgtcaacttccccatcacgaatgtagaccttcgtgagtacttgacagaagaa
gctcaagctacagagaagaacacaacttatgacctcgtcgccaacatagtgcatgatggg
aaacccactgagggagcatacagaatacatgttctgcatcatgggactgggaagtggtat
gagatgcaggacctgcaggtgatcgacattctcccccagatgatcacactttcagaggcc
tacatccagatctggaagagacaagagagtgacaatgacacaaacaaccacacaggggtg
tga
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