Lates calcarifer (barramundi perch): 108878620
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Entry
108878620 CDS
T04895
Symbol
gpc3
Name
(RefSeq) glypican-3
KO
K08109
glypican 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lcf00535
]
108878620 (gpc3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
108878620 (gpc3)
Proteoglycans [BR:
lcf00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
108878620 (gpc3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
Others
108878620 (gpc3)
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Motif
Pfam:
Glypican
Fz
Motif
Other DBs
NCBI-GeneID:
108878620
NCBI-ProteinID:
XP_018525019
UniProt:
A0A4W6FS09
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Position
LG8:complement(4915315..5011094)
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AA seq
582 aa
AA seq
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MVGSSVHGALFLCAFLQLFSLLGGQVPNCQEVRTVFQSLHPGSKWVPETPVSGSDLQVCQ
TKGPTCCSKKMEERYQVAARSNMESGLQVVSAQLKRLIIQNAAIFQEAFDLVLRHGRNST
LAMLKSEFPGLGAGAQSLVGQLFLDMSLYILGSDSAVEHMVTVLYGRLFPLTYRRLLGGS
VSSASEECVRGAWKDSGAFGPYPKLMMTRLSRSLLATRVFLQALNLGIEVVNTTDHLRPG
RDCSRALLRLWYCPHCQGMLGPPACRGFCQAVMHGCLGGAAEVQPHWRSYVDGLGKLAGS
MRGEQDMEAVVLRLPSMIKLALKHAVNARSRLSALVNGMCGHTPQRASRSVASPPPQPPA
VSAARNSQPSSPDSDETLAGLCREFISSLRGFSSFYSGLGEALCSREPASANHSLCWNGQ
EMTDRFPGPGLKRLHPGSESRSNKPPEPIISQIIDKLKHINQLLRLVTVSEKRWRARSRG
AGVDGWSDEGEEGFESGDCDDEDECTGVSGLGPPPRRKRLRIFADLADNLAMDDFTFQEQ
LLTPRLATAGVGGVSSPAAPLWRSYLVPTLPVVLALLLVCHH
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggtcggctcgtcggtccacggcgcgctctttctgtgcgccttcctccagctgttctcc
ctgctcggcggacaggtgccaaactgccaggaggtgcgcacggtgttccagtctctgcac
ccgggctccaagtgggtccccgaaaccccggtgtcaggttcggatctgcaggtttgccaa
accaaaggcccgacctgctgttccaagaagatggaggagcggtatcaggtagccgcacgc
agcaacatggagtctggcctgcaggttgtcagcgctcaactcaaacggctcatcatccag
aatgctgccatattccaagaggcctttgacctggtgctgcgccacggccgtaattccacc
ctggccatgctgaagtcagagtttccaggtctcggagccggggcccagagcttggtgggg
cagctcttcctggacatgtcgctctacatccttggctcagactctgcagtggagcacatg
gtgacggtgctctatggccgcctcttccccctcacataccgccgccttctggggggcagc
gtatcctctgcgtctgaggagtgtgtaagaggagcctggaaggactcaggagcatttggc
ccttatcccaaactgatgatgacccgtctgtctcgctccctcctggccacccgagtattc
ctgcaggcgctgaacctgggcatcgaggttgtcaacacaacagaccacctgcggccaggc
cgggactgtagccgggccctgctgaggctgtggtattgcccgcactgccagggcatgctg
gggccgccggcctgcagaggcttctgtcaggctgtgatgcacggctgccttgggggtgca
gctgaggtgcagcctcactggaggagctacgtagacggactggggaagctggctggttcc
atgaggggagagcaggacatggaggctgttgttcttagactgccttcaatgatcaaactg
gccctaaagcacgctgtgaacgcacgcagccgcctcagtgccctggtgaacgggatgtgt
ggacacactcctcaacgggcctctcgctcagtcgcatctccccctcctcagcctcccgct
gtctctgcagcccgcaactcacagccctcatccccggactctgatgagactttggctggc
ctctgcagggagttcatatccagcctgaggggcttcagctccttctacagtggcctcggg
gaggcgttgtgcagccgtgagcctgcttcagcgaaccactccctctgctggaatgggcaa
gagatgacagacaggtttcccgggcccggcctaaagcgactgcaccctggctctgagtcc
aggagcaacaaaccccctgagccaatcatcagccagatcatagacaaactcaaacacatc
aaccagttgctgcggcttgtgacggtatctgaaaagcgctggagagcccggtcgcgtggg
gccggagtggatgggtggagcgacgagggggaagagggattcgagagcggcgactgtgac
gacgaagacgagtgcaccggggtgtcagggttggggccgccaccaagacgcaaacggttg
cgcatctttgcagaccttgctgataaccttgcaatggacgacttcaccttccaggagcag
ctgctgacccctcggttggccacggccggcgtcggaggcgtctcctcgcccgctgctccg
ctctggaggagttacctggtcccgacgctccctgtggtgctcgccctgctcctggtttgt
caccactga
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