Lates calcarifer (barramundi perch): 108878642
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Entry
108878642 CDS
T04895
Name
(RefSeq) beta-1,3-galactosyltransferase 2
KO
K07820
beta-1,3-galactosyltransferase 2 [EC:
2.4.1.86
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00601
Glycosphingolipid biosynthesis - lacto and neolacto series
lcf01100
Metabolic pathways
Module
lcf_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
108878642
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108878642
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.86 N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase
108878642
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
Type 1 chain
108878642
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Ortholog
Paralog
GFIT
Motif
Pfam:
Galactosyl_T
B3GALT2_N
Fringe
Glyco_tranf_2_4
HEAT_Maestro_2
Motif
Other DBs
NCBI-GeneID:
108878642
NCBI-ProteinID:
XP_018525070
UniProt:
A0A4W6G6K5
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Position
LG13:complement(21194315..21197086)
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AA seq
319 aa
AA seq
DB search
MRTAYSWRLVKLLAVSAVFVLSAQILTSTRSKHQPKPSPITVAEYRVLSPETYQYIINHP
AVCRDRSPFLVFMVPVTPQEVSAREAIRKTWGAPGQDTLTLFYMGLPEGGQLSSIQDRLE
DESRKHADIIQMNFQDSYQNLTIKTMMMMNWLATHCPNASYVMKVDADIFVNVFYLIRWL
RSSPQQGFITGSVINDGRPRRDRNSKWHISEEQYPEDSFPPYVSGAGYVFSADLAGRISW
ASRFVRMIPLEDVYVGLCLRVLGVRPVYSFSLLTLRNLFEIRNLEYNRCTFAKLMIVNGF
NSSKLLHAWQDFSKGHTSC
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaggacagcttactcctggaggttagtcaagttactcgccgtttcagctgtgttcgtc
ctgtctgctcaaatcttgacgagtacacggagtaaacatcaaccaaagccaagccccatt
accgtggcggagtacagggtcctatctccggaaacataccagtatattatcaaccatccc
gctgtatgcagagacagaagccccttcctggtttttatggtcccagttacccctcaggag
gtttcagcaagggaagccatccggaaaacatggggtgccccaggtcaggacaccctgact
ctgttctatatggggctccctgagggggggcagttgtcaagcatccaggacaggctggag
gatgagagcaggaaacatgcggacatcatccagatgaacttccaggacagttaccagaat
ctgacgatcaagaccatgatgatgatgaactggctagcgacccactgcccaaatgcctct
tacgtcatgaaagtggatgctgacatctttgtgaatgtattttacctcatcagatggctg
aggagctctccacaacagggcttcatcacaggatcagtgataaacgatggcaggccgagg
agggacagaaacagtaaatggcacatatcagaggagcagtaccctgaagacagcttccca
ccatacgtgtctggagctgggtatgttttctccgcagacctggctggaaggatctcctgg
gcatccaggtttgtgcggatgatccctcttgaggacgtctatgtggggttatgtctgcgt
gtgctgggtgttcggccggtgtattcgttcagcctgctgaccctcaggaatctgtttgaa
atacgaaacttagagtacaacaggtgcacctttgccaaactcatgattgttaatgggttt
aactcatcaaagctgctgcatgcttggcaggatttctccaaaggccacaccagctgctga
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