Lates calcarifer (barramundi perch): 108878686
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Entry
108878686 CDS
T04895
Symbol
zgc:65851
Name
(RefSeq) low molecular weight neuronal intermediate filament
KO
K04572
neurofilament light polypeptide
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108878686 (zgc:65851)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108878686 (zgc:65851)
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108878686 (zgc:65851)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
108878686 (zgc:65851)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Fib_alpha
TolA_bind_tri
DUF2594
DUF1664
Motif
Other DBs
NCBI-GeneID:
108878686
NCBI-ProteinID:
XP_018525140
UniProt:
A0A4W6E8D0
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Position
LG13:19390344..19397272
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AA seq
524 aa
AA seq
DB search
MSYSSEIYSSSSYRKIFGDAPRSGRVGLVSSSSPSRLHSAGYRSSHRTYGSPSVMSSATF
RRTAAPGRVFSSMPESAMDLTQSTAVTNELKIIRTNEKEQLQGLNDRFVSFIEKVHNLEQ
QNKVLEAEVTLLRQRNSEPSRLHELYEQEIRELRARVEELTHEKSQMHLDCVQMNETLER
VREKLEEETRLREEAENTLKGYRKDVDDATLARLELEKKVESLLDEIAFLRKVHEEELQE
LQASLQATQVSVEMDMSKPDLAAALKDIRAQYENLSARNQVQAEEWYRSKFASVTEAAAR
NQDAIKHSKEELSEYRRQVQARTLEIEALRGHNEALERQIAEMEDRHNNEIGEMQDTIQQ
LEAALRSTKGEMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEECRLSSVGGAVVQSGYP
GFSYMSARTYTLGAYRKSGAKPEEEEEEAEEEEKEEEEEGEEGEEGEEGEEEAEEGEEGE
EGEEGEGEEGEEEEEEEEEEKEKPKEKDEKEKKKESPTGKNSKS
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgagttactccagcgaaatttacagcagcagctcctatcggaagatcttcggagatgcc
ccccggtccggccgcgtgggtctggtgagcagcagcagcccgtcccggctgcattctgcg
ggataccgcagcagccaccgcacctatggttccccttccgtgatgtcctccgccaccttc
cgcaggacagcggcgcccggccgcgtcttctcctccatgccggagtccgcgatggacctg
acccagtccaccgcggtcaccaacgagctcaagatcatccgcaccaacgagaaggagcag
ctgcagggcctcaacgaccgcttcgtgtccttcattgagaaagtgcataacttggagcag
cagaacaaagtcctggaggcggaggtcacgctgctgcggcagcgcaacagcgagccctcg
cgcctgcacgagctgtacgagcaagagatccgcgagttgcgggcgcgcgtggaggagctg
acgcacgagaagagccagatgcacctggactgcgtgcagatgaacgagacgctggagcgc
gtgagggagaagctggaggaggagaccaggctgcgcgaggaagcggagaacaccctgaag
ggctaccggaaggacgtggacgacgcgaccctggcgcgcctggagctggagaaaaaagtt
gagtcactgctggacgagatcgccttcctcaggaaagttcatgaggaggagctgcaggag
ctgcaggcgtctctgcaggccacacaggtgtcagtggagatggacatgagcaaaccggac
ctggctgccgccctgaaggatatccgggctcagtacgagaacctgtcagccaggaaccag
gtccaggcagaggagtggtaccgctccaagttcgccagtgtgaccgaggcagctgcccgc
aaccaggatgccatcaagcactcaaaggaggagctgagtgagtaccgcaggcaggtgcag
gcccgcaccctggagatcgaggccctcaggggccacaacgaggccctggagaggcagatt
gctgagatggaggatcgccataacaatgaaattggagagatgcaggacaccatccagcag
ctggaggctgcactgcgcagcaccaagggagaaatgtcccgtcacctgcgtgagtaccag
gacctgctgaacgtcaagatggctctggacattgagatcgctgcctacaggaagctgctg
gaaggcgaggagtgccgcctcagctctgttggtggagccgtggtccagtcgggctaccct
ggcttctcctacatgtcagcccgaacctacaccctgggagcctacaggaagtccggtgcc
aagcctgaggaggaggaagaggaggctgaggaggaggagaaggaggaggaggaggaggga
gaggagggagaggagggagaggagggagaggaggaggccgaggagggagaagagggagag
gagggagaggagggagaaggagaggaaggtgaggaggaggaagaggaagaggaggaggag
aaggagaagccaaaggagaaagacgagaaggagaagaagaaggagagccccaccggcaag
aacagcaagagctaa
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