Lates calcarifer (barramundi perch): 108878705
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Entry
108878705 CDS
T04895
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108878705 (smarcad1a)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108878705 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
HDA2-3
ERCC3_RAD25_C
HHH_3
Motif
Other DBs
NCBI-GeneID:
108878705
NCBI-ProteinID:
XP_018525166
UniProt:
A0A4W6BS95
LinkDB
All DBs
Position
LG13:complement(7454337..7466995)
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AA seq
1071 aa
AA seq
DB search
MSLFNLDRFRFEKKGATEANKDHDSGSKSPESEKENKPAQMKPVKAPPKSHARGVVFEEV
LSIDLEEDEVLSEPKTKITSTRKFTNPTGKSSRNVVSDHTDDEDNELEGKINRLLEMFPQ
VTRKEAKEVIASTSTLDGAVAVCLLKFGDKEAPDQGRKRKLDGSSSSQESGKFQPSKKRR
PSVQENSDEEESEGKEPSWERQEAMVRRLQKKFPDQDKEELRMVLQEHDWNVEDALQVLQ
MFSDPDNTSFSSPESEEKKSSKSKSKDKSSRDHRKLNRHNGHGDSKNRNDRKDSKNQRHV
SETEEDSTDDSEATKDSEDESGSEDGEGSKHRSGTSTLSTWIKKSSDTVLSSSSVKKKTT
SSSLPSSSSSAAQMLSKFASGTSIAKNQAAERKRKARASDEHVSSEGEDDDEEDTVSSEF
EDSDDELDSKGGMTEIKKEILAFFQDASIDELSLIAGCSVKKAQKIVELRPFDSWESLIE
VFHKENGLSEDLLLGCRVVLKERKVVLGLMSKCETISSKMVKQVTEVMEKGTGAMKQPSV
LNSQFQMKPYQLIGLKWLLLLHEHKLSGILADEMGLGKTIQAIAFLAQLYQNGIEGPHLI
TVPSSTLDNWVRELKLWCPSLSVLVYYGSVEDRRYLRHDILNEDVDFNVIVTTYNLAIGN
DYDRSLFRKLRLKYAVFDEGHMLKNMNSLRYRHLMAINAEHRLLLTGTPLQNNLLELMSL
LNFIMPSMFSSSTTQLSKMFSMKSHEEQSRFERDRISQAKLIMKPFILRRVKSEVLKQLP
AKEEKVEFCSMSEKQQALYQTLFKKLKTSTNGEKRELCNVMMQLRKMANHPLLHRQYYTT
EKLKAMSKLMLKEPTHFDADAALIQEDMEVMSDFELHRLCQQYSSISSYQLENNLLLDSG
KFHHLTELLASLKNKGDRVVLFSQFTMMLDIVEVLLRHLKHRYVRLDGSTPIADRIVLID
EFNTDPDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTRTVQV
IKLISKDSIEDCILQLGQKKLKLEQDMTTAEQGEGTIPEDMASLLKASLGL
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttcaatttggatcgttttcgtttcgagaagaagggagcgacagaagcgaac
aaagaccacgatagcggctccaaaagtccagaatctgagaaggagaacaagccagctcag
atgaaacctgtcaaagccccaccaaagtcccatgctagaggagtggtttttgaggaagtc
ctctctattgacttagaggaggatgaggtcctttctgaaccaaagaccaaaataacatca
actaggaaattcacgaatcccacagggaaatcatccagaaatgtggtatcggatcatacg
gatgatgaggacaatgaactggagggaaaaatcaacagactactggagatgtttcctcag
gtaacaaggaaggaggccaaggaggtcattgcaagcacaagcacattggatggggctgta
gctgtctgccttttaaagtttggtgataaagaagccccagatcaaggcaggaagagaaaa
ctggatggatccagcagttctcaggagagtggtaaatttcaacccagcaagaagaggaga
ccatcagtgcaagagaactctgatgaagaagagagtgaaggtaaagagccgagttgggaa
aggcaggaggccatggtgagaagactgcagaagaagtttcctgaccaggacaaggaggag
ctgcggatggtgctgcaggaacacgactggaatgttgaggacgctctgcaggttctgcag
atgttctcagacccagataataccagcttcagctcaccggagtcagaagaaaagaaatcc
agcaaatcaaagagcaaagacaagtcaagcagggaccacagaaagttgaatcgccacaat
ggtcatggagacagtaaaaacaggaatgaccgtaaggactctaaaaaccagagacatgtc
agtgaaacagaggaagacagtacagatgattcagaagccacgaaggacagcgaggacgaa
tcaggctcagaagacggagaaggttccaaacacagaagtggcacttccactctatctaca
tggattaaaaaaagttctgacactgtgttgtcgtcctcctctgtcaagaaaaaaactacc
tcttcctccctgccgtcgtcctcttcttctgctgcccagatgctgtccaagtttgccagt
gggaccagcatagctaagaatcaggcagcagagagaaagagaaaggcccgcgcctcagat
gaacatgtcagttctgagggggaagacgacgatgaagaggacacagttagcagcgagttt
gaggactcagatgatgagctggactctaaaggtggcatgactgaaataaagaaggagata
ctcgccttcttccaggacgcatcgatagatgagctgtcgctgatcgctgggtgttctgtt
aaaaaggcccagaaaattgtggaactgagacccttcgatagctgggaaagcctgattgaa
gtctttcataaggaaaatggactctcagaggatttactgctgggctgcagagttgtcctc
aaagagaggaaggttgtcttggggctcatgtccaaatgtgagaccatttcttcaaaaatg
gtcaaacaggtcactgaagtgatggagaagggcacaggggccatgaaacagcccagtgta
ctcaacagccagttccagatgaaaccctatcagctgattggtcttaagtggctgctgctt
ctgcatgagcacaagctgagtggtatccttgctgatgaaatgggtttggggaaaactatc
caggccatagcatttctggctcagttataccagaatggaatagagggtcctcatctcatc
actgtgccatcctctacactcgataactgggtcagggagctgaagctgtggtgtccaagc
ctcagcgttctagtctattatggatctgtggaggaccgccgctacctcagacacgacatc
ctcaatgaagatgttgacttcaacgtcatagtgaccacgtacaacttggccatagggaac
gattatgatcgcagccttttccgcaagctgcgtcttaagtatgctgtgtttgatgaaggt
cacatgctgaagaacatgaactccctccgctaccgccaccttatggctattaatgcagag
catcgcttgctgctgacaggaactcctttacagaacaacctcttggagctgatgtctctc
ttgaacttcatcatgccttctatgttctctagctccactacacagctctccaaaatgttt
tctatgaaatcccatgaggagcagagccgctttgaaagggatcgtatttctcaggccaaa
ctcatcatgaaaccctttatcctccgaagagtcaagagcgaggtcctcaagcagctgcca
gcaaaggaggagaaggtagagttctgctcaatgagtgagaaacagcaggctctctaccag
accctctttaaaaagctcaagacttctaccaatggcgagaagcgtgagttgtgtaatgtg
atgatgcagttgaggaagatggccaaccacccactgcttcacagacagtattacaccaca
gaaaagctcaaagccatgagcaaactcatgctcaaggagccaactcattttgatgcagat
gctgctctgatccaggaggacatggaagtgatgtcagactttgagctgcatcgtctgtgc
cagcagtactcctccatcagctcctaccagcttgaaaacaatctcctgcttgactctggg
aaattccaccacctcactgagctgctggcctctcttaaaaacaagggggatagagtggta
ttattcagtcagttcaccatgatgctggacattgtggaagtactgctgagacatctcaag
catcgttacgtcagactggacggatccacacccatagctgacaggatcgtgttgattgat
gaattcaacacagaccctgacatatttgtgttcctgttatcaacacgtgctggtggcttg
ggcatcaacctcacctcagctaatgttgtcattctacatgacatcgactgcaatccctac
aatgacaaacaggcagaggacaggtgtcaccgtgtaggccagaccaggactgtgcaggtg
attaagctgatctctaaggacagcatagaggactgcatactgcagctgggccagaagaaa
ctaaagctggagcaggacatgactactgctgaacagggtgagggaaccatacctgaagat
atggcttctttgctcaaagcttcactgggactgtga
DBGET
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