Lates calcarifer (barramundi perch): 108878720
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Entry
108878720 CDS
T04895
Symbol
vamp8
Name
(RefSeq) vesicle-associated membrane protein 8
KO
K08512
vesicle-associated membrane protein 8
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04130
SNARE interactions in vesicular transport
lcf04140
Autophagy - animal
lcf04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108878720 (vamp8)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
108878720 (vamp8)
04140 Autophagy - animal
108878720 (vamp8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108878720 (vamp8)
Membrane trafficking [BR:
lcf04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
108878720 (vamp8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
Baculo_F
LRRC37AB_C
Prominin
RNF152_C
Baculo_11_kDa
Fzo_mitofusin
RIFIN
vMSA
ODV-E18
DUF7977
DUF1129
CD34_antigen
Orf78
DUF3619
DUF948
Motif
Other DBs
NCBI-GeneID:
108878720
NCBI-ProteinID:
XP_018525191
UniProt:
A0A4W6G9F1
LinkDB
All DBs
Position
LG13:complement(20066793..20072533)
Genome browser
AA seq
125 aa
AA seq
DB search
MDIDPERGEVAPAPEPQDRVQTLKDQVDGVKHIMTQNVDRILARGERLDDLMGKSEDLQA
GAQHFKQTSQKVARSYWWKNVKLVVVIVVVVLIIVLIIILLATGVIPVSAPVPPIVGPTT
GPHKP
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atggacattgatccggagcggggagaagtggcaccagcaccagagccccaggacagggtg
cagaccttgaaggatcaggtagatggagtgaaacacatcatgacacagaatgtggaccgg
atcctggcccggggagagaggttggacgacctcatgggcaagtcagaggaccttcaggca
ggggctcaacacttcaagcagacgtctcagaaagtggctcgctcttactggtggaagaac
gtcaagctggtcgtggtcattgtggtggtcgtcctcatcattgtcctcatcatcatcctg
ctggccaccggggtcatccctgtcagtgctcccgtgcctcctatagtcggtcccaccacc
ggccctcacaaaccctaa
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