Lates calcarifer (barramundi perch): 108878740
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Entry
108878740 CDS
T04895
Name
(RefSeq) early growth response protein 3
KO
K12497
early growth response protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
108878740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108878740
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
108878740
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3446
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2HC_2
zf-BED
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
108878740
NCBI-ProteinID:
XP_018525223
UniProt:
A0A4W6G7Z0
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Position
LG13:14239859..14246257
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AA seq
410 aa
AA seq
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MTGKLAEKLPLTMSSLINTIPDSLYPEEDIPTSMNIFTSTESINHYSQMNTDNIMDLGMG
SEKASAEIQYGSSFQSNRSGQTVTYLGKFAFDTPPSGGIGGSGWCSDNNIISLVSAGILG
VSPSPGTVTTQTSSSAASMGGQTSDMEQVYGPPLPAYSTCSDLYQDQVSFHHSPATSTAL
AYPGNDYHSTSKASMDGSLFSMIPDYNLFHHQGEVGVMEHKPFQTMDPIRVNPPPITPLE
TIRAFKDKQQIHPGFIGGQQHPPQHHPPPQTLTLKPIRPRKYPNRPSKTPVHERPHACPA
ENCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCEFCG
RKFARSDERKRHAKVHLKQKDKKPADKSSGAAGSHSSPPSSCGGPTVGTS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgacagggaaactagcggagaagctccctcttaccatgagcagtttaataaacacgatc
cctgacagtctctacccagaagaggacatcccgacgtctatgaatattttcaccagtacg
gaatctattaaccactattcacaaatgaacacagataatatcatggatctgggcatggga
agcgagaaagcaagcgcagagattcagtatggatccagcttccagtccaaccgcagcggg
cagactgtcacctatctggggaagtttgcctttgacactcctccgtcaggtggcatcggt
ggctctggctggtgctctgataacaatatcataagtctcgtcagcgccgggatcctgggt
gtttctccatcacccggcacggtaacgacgcagacatcatcctccgcagccagcatgggc
ggacagacgtcagatatggagcaggtatatggtccaccactgcctgcctattccacctgc
agtgacctgtaccaggatcaggtctccttccaccacagccctgccaccagcacagctcta
gcctaccctggcaatgactatcactccacatccaaagcctccatggatggcagccttttc
tccatgatccctgactacaaccttttccatcaccagggagaggttggtgtgatggagcac
aagccctttcagaccatggaccccatccgagtcaaccctccacccatcacgcccctagag
accatcagagcgttcaaagacaagcagcaaattcacccaggtttcatcggcgggcagcag
caccctcctcagcaccacccaccgccacagactctcaccctcaaacccatccgaccgagg
aagtaccccaaccgtcccagcaaaacccccgtccatgaacggccgcacgcctgtccggca
gagaactgtgacagacgcttctcacgttcagatgagctcacacgtcacctccgcatccac
acaggtcacaaacccttccagtgccgaatatgcatgcgctccttcagccggagtgaccac
ctgaccacgcacatccgcacgcacacaggcgagaagcccttctcctgtgagttctgtgga
cgcaagtttgccaggagtgacgagcgaaagagacacgcaaaggttcacctgaaacagaag
gacaagaagccagctgacaagagcagtggggcagctgggagccacagctcgccacccagc
tcctgtggggggccaacagtgggaacatcatga
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