Lates calcarifer (barramundi perch): 108878776
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Entry
108878776 CDS
T04895
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03022
Basal transcription factors
lcf03420
Nucleotide excision repair
lcf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108878776
09124 Replication and repair
03420 Nucleotide excision repair
108878776
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108878776
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108878776
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108878776
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108878776
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108878776
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
108878776
2.7.11.23 [RNA-polymerase]-subunit kinase
108878776
Protein kinases [BR:
lcf01001
]
Serine/threonine kinases: CMGC group
CDK family
108878776
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108878776
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
108878776
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108878776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
APH
Motif
Other DBs
NCBI-GeneID:
108878776
NCBI-ProteinID:
XP_018525268
UniProt:
A0A4W6G971
LinkDB
All DBs
Position
LG13:11366920..11372002
Genome browser
AA seq
343 aa
AA seq
DB search
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKTTDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELHHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYMHQHWVLHRDLKPNNLLLDGNGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRIPFLAGDSDLDQLTKIFEALGTPTEETWPGV
SSLPDYVSFKIFPGTPLEHIFSAAGDDLLELLQGLFTFNPSTRTTATQALKMGYFSNRPG
PTPGPQLPRPNCSAEALREKETVGHKRKIEGLETTVMKKKLIF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgatgtaaaatccagagccaagcgatacgagaaactagattttctcggagag
ggtcagtttgccacagtgtacaaagccagggacaaaacgactgacacgatagttgccatt
aaaaagattaaagttggtcacagaactgaggctaaagatggtataaacaggactgctctg
cgagagatcaagctgctgcaggagctgcatcatccaaatatcattgggctgctggatgcc
tttggacacaaatctaatatcagtctggtgtttgacttcatggagacagatctagaggtg
atcatcaaagacaccagcctagtcctgactccagccaacatcaaagcctacatcctcatg
actctacagggattagagtatatgcatcaacactgggtcctacacagggatctgaagccc
aataatctgctgttggacggcaatggagtgttgaagttggctgattttggtttggccaaa
tcatttggcagccccaacagagtctacacacatcaagttgttaccaggtggtaccgctcc
cctgagctcctgtttggtgccaggatgtacggtgtgggtgttgacatgtgggcagtggga
tgcatcctggcagagttgctccttcggataccattccttgctggagactcagatcttgac
cagctgactaagatctttgaggctcttgggacgcccacagaagagacatggcctggagtt
agtagtctaccagactacgtgtccttcaaaatctttcctggcactcctctggaacatata
tttagtgcagctggagacgacttactagagctgctacagggcctcttcacctttaacccc
tcaacaaggaccacggctacacaggctctgaagatggggtacttcagtaatcggcctggt
cccactcctggtccacagcttccccgacccaactgttctgctgaggctctgagggagaag
gaaacagtcgggcataagaggaaaatagaaggcctggagacaactgtaatgaagaagaag
ctcattttctga
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