KEGG   Lates calcarifer (barramundi perch): 108878776
Entry
108878776         CDS       T04895                                 
Name
(RefSeq) cyclin-dependent kinase 7
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03022  Basal transcription factors
lcf03420  Nucleotide excision repair
lcf04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108878776
  09124 Replication and repair
   03420 Nucleotide excision repair
    108878776
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    108878776
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:lcf01001]
    108878776
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lcf03021]
    108878776
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108878776
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108878776
Enzymes [BR:lcf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     108878776
    2.7.11.23  [RNA-polymerase]-subunit kinase
     108878776
Protein kinases [BR:lcf01001]
 Serine/threonine kinases: CMGC group
  CDK family
   108878776
Transcription machinery [BR:lcf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     108878776
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     108878776
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     108878776
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Seadorna_VP7 ABC1 Kinase-like APH
Other DBs
NCBI-GeneID: 108878776
NCBI-ProteinID: XP_018525268
UniProt: A0A4W6G971
LinkDB
Position
LG13:11366920..11372002
AA seq 343 aa
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKTTDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELHHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYMHQHWVLHRDLKPNNLLLDGNGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRIPFLAGDSDLDQLTKIFEALGTPTEETWPGV
SSLPDYVSFKIFPGTPLEHIFSAAGDDLLELLQGLFTFNPSTRTTATQALKMGYFSNRPG
PTPGPQLPRPNCSAEALREKETVGHKRKIEGLETTVMKKKLIF
NT seq 1032 nt   +upstreamnt  +downstreamnt
atggcgcttgatgtaaaatccagagccaagcgatacgagaaactagattttctcggagag
ggtcagtttgccacagtgtacaaagccagggacaaaacgactgacacgatagttgccatt
aaaaagattaaagttggtcacagaactgaggctaaagatggtataaacaggactgctctg
cgagagatcaagctgctgcaggagctgcatcatccaaatatcattgggctgctggatgcc
tttggacacaaatctaatatcagtctggtgtttgacttcatggagacagatctagaggtg
atcatcaaagacaccagcctagtcctgactccagccaacatcaaagcctacatcctcatg
actctacagggattagagtatatgcatcaacactgggtcctacacagggatctgaagccc
aataatctgctgttggacggcaatggagtgttgaagttggctgattttggtttggccaaa
tcatttggcagccccaacagagtctacacacatcaagttgttaccaggtggtaccgctcc
cctgagctcctgtttggtgccaggatgtacggtgtgggtgttgacatgtgggcagtggga
tgcatcctggcagagttgctccttcggataccattccttgctggagactcagatcttgac
cagctgactaagatctttgaggctcttgggacgcccacagaagagacatggcctggagtt
agtagtctaccagactacgtgtccttcaaaatctttcctggcactcctctggaacatata
tttagtgcagctggagacgacttactagagctgctacagggcctcttcacctttaacccc
tcaacaaggaccacggctacacaggctctgaagatggggtacttcagtaatcggcctggt
cccactcctggtccacagcttccccgacccaactgttctgctgaggctctgagggagaag
gaaacagtcgggcataagaggaaaatagaaggcctggagacaactgtaatgaagaagaag
ctcattttctga

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