Lates calcarifer (barramundi perch): 108878794
Help
Entry
108878794 CDS
T04895
Name
(RefSeq) cytoplasmic tRNA 2-thiolation protein 1
KO
K14168
cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
108878794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108878794
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
108878794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
zn-ribbon_14
TtuA_LIM_N
tRNA_Me_trans
zf-RING_UBOX
PAPS_reduct
Motif
Other DBs
NCBI-GeneID:
108878794
NCBI-ProteinID:
XP_018525291
UniProt:
A0A4W6F033
LinkDB
All DBs
Position
LG13:17615842..17618979
Genome browser
AA seq
343 aa
AA seq
DB search
MPVLCSSCAEKRAVLKRPKTGHSLCKECFFWAFEEEVHQTIVAAKLFKPGETVGIAASGG
KDSTVLAHVMKVLNERYSYGLELMLLSVDEGITGYRDDSLETVKRNQQQYELPLKIVSYE
ELYGWTMDAIVKQVGLKNNCTFCGVFRRQALDRGAIMLKVDKICTGHNADDVAETVLMNV
LRGDIARLRRCTAISTASEGEGVVPRCKPLKYAYEKEIVLYAYFKKLDYFSTECIYSPNA
YRGYARTFLKDLESVRPSSIMDIIHSGENLSVREGVKMPVQGTCNRCGYISSQALCKSCV
LLEGLNRGLPKLGIGKHHRLHDKILSQQPLTEKEERKLKSVDF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcctgtgcagcagctgtgcagaaaaacgagctgtgctgaaacgtcccaaaaca
ggccactcattgtgtaaggagtgcttcttctgggcctttgaggaggaggtgcatcagacg
attgtggcagcaaagctctttaaaccaggggaaacagtaggaattgctgcctcgggaggg
aaggactctacagtgctcgcacatgtaatgaaggtcctaaatgagcgatacagctatggc
cttgaacttatgcttctgtcagtggatgagggaatcactggttaccgagatgactcgttg
gagaccgtaaagaggaatcagcaacagtatgaactgccactgaagattgtgtcttatgag
gagctgtatggctggaccatggatgctatagtaaagcaggtgggactgaaaaataactgc
actttctgtggagtattcagaaggcaggcactagacagaggagccatcatgctgaaagtg
gacaagatatgtacaggtcacaatgctgacgatgtggcagaaactgtcttgatgaacgtc
ttgcgaggggacatagctcgtttgcgtcgctgcactgccatctccacagccagcgagggc
gaaggggtcgtcccgcgctgcaagcccctcaaatatgcgtacgagaaagagattgttctg
tacgcttactttaagaagttggactacttctccactgaatgtatctactcacccaatgct
tatcgtggctatgcgaggacctttttaaaagacctggagagtgtaaggcccagctccatc
atggatatcatccactccggtgagaacctgtctgtgcgggagggggtgaagatgcctgtg
caggggacctgtaatcgctgcgggtatatctccagccaggcactgtgcaagtcatgtgtg
ctgctggaggggctgaacagaggcctgcctaaactgggtataggcaaacaccaccgtctg
catgacaaaatcctctcccagcagcctctaactgagaaggaggagaggaagctgaaatca
gtagacttttga
DBGET
integrated database retrieval system
