Lates calcarifer (barramundi perch): 108878812
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Entry
108878812 CDS
T04895
Symbol
si:ch211-247n2.1
Name
(RefSeq) calcium-activated potassium channel subunit beta-2
KO
K04938
potassium large conductance calcium-activated channel subfamily M beta member 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
108878812 (si:ch211-247n2.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108878812 (si:ch211-247n2.1)
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
108878812 (si:ch211-247n2.1)
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Motif
Pfam:
CaKB
KcnmB2_inactiv
Motif
Other DBs
NCBI-GeneID:
108878812
NCBI-ProteinID:
XP_018525298
UniProt:
A0A4W6EVM2
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Position
LG17:2721442..2735560
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AA seq
233 aa
AA seq
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MFLWAGSKATDGRSDRRSIYQKIREYEVLDKRKTVTALRAGEDRAILLGLSMIFFSVMMY
FVLGITILRSYSDSVWTDEASCTIVNSTIMWDVNCSYSCGAECWKVSRYPCLQVYVSLNS
SGKVVRLLHNEETQDNNPECFYIPKCSKDYAATQAIVQNISERLRSQHTVQCFVDPTDRM
DNAILTQIYGQVAVFHSLFWPTCTLIGGTLIIAMVKLTQYLSIMCERLSRIKR
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctgggcaggaagtaaagcaacagatggaagaagtgatcgcagatccatctac
cagaagattcgtgagtatgaggtgctggacaagaggaagacagtgacagctctgagagca
ggagaggacagagccatattgctgggcctcagcatgatcttcttctctgttatgatgtac
tttgtcctgggaatcaccatactgcgctcctactctgacagtgtgtggaccgatgaggct
agctgcactattgtgaactccaccattatgtgggatgtaaactgttcgtacagctgtgga
gcagagtgctggaaggtttcccgttacccctgtctccaggtctacgtcagtctcaactcc
tcaggaaaggtggttcgactgctgcacaatgaggagacacaggacaataaccctgagtgc
ttctacatcccaaagtgcagtaaggactatgcagccacacaggccatagttcagaacatt
tctgagcgtctcaggtctcagcacacagttcagtgttttgtagaccctacagacaggatg
gacaatgccattttgactcagatctatggccaggtcgccgtcttccactccctgttctgg
ccaacctgcaccttgatcggaggaaccctcatcattgccatggtgaagctgacccagtac
ttatccattatgtgtgagcggctaagccgcatcaagaggtga
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