Lates calcarifer (barramundi perch): 108878820
Help
Entry
108878820 CDS
T04895
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108878820
04082 Neuroactive ligand signaling
108878820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108878820
Ion channels [BR:
lcf04040
]
Ligand-gated channels
GABA-A
108878820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Zip
Hmw_CFAP97
FAM199X
Motif
Other DBs
NCBI-GeneID:
108878820
NCBI-ProteinID:
XP_018525318
UniProt:
A0AAJ7LLZ9
LinkDB
All DBs
Position
LG8:4475380..4498596
Genome browser
AA seq
560 aa
AA seq
DB search
MVSAKKKEMVTAMCPAAFIRTLFYFFCLATCVKKISGQTRKDERIYPENFTRILDRLLDG
YDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLMYEGPIEILR
LNNLMVTKVWTPDTFFRNGKKSVAHNMTAPNKLFRIMKNGTILYTMRLTISAECPMKLVD
FPMDGHACPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETIKS
ITGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT
MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTQAQIERAKKKPAKC
PPVPQTTPVKVKDTEEVLQQNPDTNGNLRKRMNYISHQESSSHQRAQSTTSIPGVGRARP
LRPLASGANGSSSTLSRSSPKSESLLSVASSSAQLVKSTPQAAASTPDVMAGTPCKQNTT
TTSSSSLQHLLGPKLERIQMMGNKLELKQTPCSQPTTAGMGGTSKIDKYARILFPVSFGA
FNMVYWVVYLSKDTMVAKGG
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaagaaggagatggtgacagcgatgtgccccgccgcttttattcgg
accctcttctactttttctgtttggcgacttgtgtaaagaaaatctctgggcagacaaga
aaggatgaaaggatctatccggagaattttactcgcattttagatcgacttctggacggc
tatgacaacaggctacgacctggattcggaggtcctgtgactgaggtcaagacagacatt
tatgtgacaagttttgggcctgtttcagatgttgaaatggagtacacaatggacgtattc
tttcgccagacgtgggttgaccgaaggttgatgtatgagggccccatagagattttaagg
ctgaacaacctgatggtgactaaggtgtggacaccagacaccttcttcaggaacggcaag
aagtcggtggctcacaacatgacggcccccaacaagctcttccgcatcatgaagaatggc
accatcctctacaccatgaggttgaccatcagtgctgagtgtccaatgaagcttgtggac
ttccccatggatggacatgcatgccctctcaaatttggaagctatgcctatcctaaaacg
gagatgatctatacctggaccaaagggcctcagcattcagtggaggtcccccctgagtcc
tccagcctcgttcagtatgatctcatcggccagacggtctccagtgaaacgattaaatcc
atcacaggtgaatatgtggtgatgacggtctacttccacttgaaacgtaaaatgggctac
ttcatgatacagacgtatatcccctgcataatgacagtaatcctctcccaagtgtccttc
tggataaataaagaatcagtcccggcgcgcacagtcttcggcattaccactgtcctgacc
atgacgacactcagtatcagcgctcgccactccctccccaaggtctcctatgccactgcg
atggactggttcatcgctgtctgctttgcctttgtcttctctgccctaattgagttcgct
gctgtaaactacttcacccaagcgcagatcgagcgggccaaaaagaagccagccaaatgt
cccccggtgccccaaaccacgcctgtcaaggtcaaggacacagaggaagtgctgcagcaa
aatcctgacaccaacggtaacctgagaaagcggatgaattacatttcccaccaggagtcg
agcagccaccagagagcccagtccaccaccagcattccaggcgtaggaagagccagaccg
ctgcgacctttagccagtggagccaacggcagctcctccaccctctcccgctccagcccc
aagtctgagagtctgctcagcgtggcctcgtcctctgcccagctggtgaagagtacgcct
caggctgctgcttccacgccagacgtgatggcggggacaccatgcaaacagaacaccacc
accaccagctcctcgtctctgcagcatctgctggggcccaagctggagcgcatccagatg
atggggaacaagctggagctaaagcagacgccgtgctcccagcccaccactgctggtatg
ggtggaaccagcaaaattgacaaatacgcacggatcctgttcccggtgtcctttggggca
tttaacatggtgtactgggtggtttacttatcaaaggacacaatggtggctaaaggtggc
tag
DBGET
integrated database retrieval system
