Lates calcarifer (barramundi perch): 108878881
Help
Entry
108878881 CDS
T04895
Name
(RefSeq) TBC1 domain family member 23 isoform X1
KO
K22555
TBC1 domain family member 23
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108878881
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108878881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBC1D23_C
RabGAP-TBC
Rhodanese
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
108878881
NCBI-ProteinID:
XP_018525391
UniProt:
A0AAJ7LLN4
LinkDB
All DBs
Position
LG17:complement(5247357..5258328)
Genome browser
AA seq
696 aa
AA seq
DB search
MADAVEEALLGSWDQDLAEALDSGGSDMEMERGIIQVQEHSVQHKAKMWKIALNVSGKGD
SLSPWDGVLDLPEQTLIHNRSQQLIDQLGASEEEQSDMVSDIESVITFYCKSRNITFTPE
LSWPHLLKPLLGLQLPRSDLYNCFYAVMNKYIPRDCVPNGRPFHLYRLLLQYHEPELCSF
LDTKKITPDSYAINWLGSLFSSHCLPDVTQALWDSYLQQADPFLIFFLMLVMLVNAKESI
LAQEGDSKEDIIKMLEAFPSLLGAEDIEDLFSLAQYYQSKTPLSLRKMNQNLFGSSLVAL
KEEDTDLSQALCLPVSVPEILQANQLQQDGVRFFVVDCRPAEQYNAGHLSTAFHLDSDLM
LQNPSEFALSVKSLLETQKQSLESGSIASGEHLCFMGSGREEEDMYMNMVLAHFLQKNKE
YVSIAKGGFMALQQHLVDMNVEGLDSSYVHWIVSTSGSHSSLSSADGESLSSPGDSKGVK
SLVNKMTFALKSKSVNVKEKMISFIENTSTPVDRISFNLPWPEKVIPDRHVSSSDRVGKP
YRGVKPVFSIGDEEEYDTDEIDSSSMSDDDRKEIVNIQTWINKPDVKHHIPCNEVKETGH
MFPSHLLITATHMYCLREIASRKGFAYIQSRQALNSVVKITSKKKHPELITFKFGSNNSA
GVEISAVERYLIPNAGDATKVIKQQIMKVLDALESS
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgccgtggaggaagctcttctgggcagctgggaccaggatctagctgaggct
ctggactctggtggttctgatatggagatggagagaggcatcatccaggtccaagaacat
tcagttcaacataaggccaagatgtggaagattgctctaaatgtctctggaaaaggagac
agtctgtctccctgggatggcgtcttagatttaccagaacagacacttattcataaccgc
agtcaacagctgattgatcagctgggagcatcagaggaggagcagagtgatatggtgtca
gacattgagtcagtcatcactttctactgtaagtcccgcaacattaccttcactccagag
ctaagctggccacacctgctcaaaccactactggggcttcagcttccccgcagcgacctc
tacaattgcttctatgctgtcatgaacaaatacatccccagggactgtgtgccaaacggt
cgacctttccacctgtacagactactgctgcagtaccacgagccagagctctgctccttc
ttggacaccaaaaagatcacacctgattcctacgccatcaactggctgggcagtttgttt
tccagtcactgccttcctgatgtaacccaggccttgtgggactcctaccttcagcaggct
gaccccttcctcatcttcttcctcatgctcgtcatgctcgtcaatgccaaagaatccatc
cttgcacaagagggagacagcaaagaggacatcatcaaaatgctggaagcctttccctct
ctcctgggagctgaagacattgaagatttgttttctttggcccagtattaccagagcaag
acccctttgtcgctcagaaagatgaatcagaatctgtttggtagcagcctagtggctctg
aaagaggaggacactgacctgagtcaggccctgtgtctccctgtgtctgtccctgaaatc
ctgcaggccaaccagctgcagcaggatggagtacgtttctttgtggtggactgtcggcct
gcagagcagtataacgctgggcacctgtccacagccttccacctggactctgacctgatg
ctccaaaacccttctgagtttgctctttctgtgaaatctctgttggagactcagaaacag
tctttagagtctggctccattgccagtggagagcacctgtgcttcatgggcagtgggagg
gaggaggaggacatgtacatgaacatggtgctggcccatttcctgcagaaaaacaaagaa
tatgtcagcattgctaaaggaggtttcatggccctccagcagcatctggtagacatgaat
gttgaaggcctggactcttcatatgtacactggattgtcagcacatcaggatctcacagc
agcctcagctctgctgatggagagtctctgagcagccctggagacagcaaaggtgtcaaa
tccttggtcaacaaaatgacatttgcgctcaagtccaagtcagtaaacgtaaaggagaag
atgatcagcttcattgagaatacctccacccctgtagacagaatatctttcaatctgcct
tggccagagaaggtgattccagatcggcacgtgagcagcagtgatcgtgttggcaaacca
tatcgaggtgttaaacctgtgttcagtattggtgatgaagaggagtatgacacagatgag
atcgacagctcgtccatgtcagacgatgacaggaaggaaattgtcaacattcagacctgg
ataaacaaaccagatgtgaagcatcacattccatgtaatgaggtgaaagaaactggccac
atgttcccgagccacttgttgatcacagcgactcacatgtactgcctgagggagatcgct
tcaaggaaaggctttgcctacattcagtccagacaagcactgaactctgtggtgaagatc
acatccaaaaagaagcaccctgaactgattacgttcaagtttggcagcaacaactcagct
ggagtggagatatcagcagttgagagatatttgataccaaatgcaggcgatgccaccaag
gtcattaagcagcagatcatgaaagtcctagatgccctggagagctcgtaa
DBGET
integrated database retrieval system
