Lates calcarifer (barramundi perch): 108878885
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Entry
108878885 CDS
T04895
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 46
KO
K11842
ubiquitin carboxyl-terminal hydrolase 12/46 [EC:
3.4.19.12
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108878885
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108878885
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108878885
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108878885
Ubiquitin system [BR:
lcf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108878885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Peptidase_C98
DUF8270
FliB_C
Motif
Other DBs
NCBI-GeneID:
108878885
NCBI-ProteinID:
XP_018525400
UniProt:
A0AAJ7LL10
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All DBs
Position
LG17:complement(6052999..6064478)
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AA seq
369 aa
AA seq
DB search
MTVRNIASICNMGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFR
ENVLAYKAQQKKKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQD
AHEFLNYLLNTVADILQEEKKQEKQNGRLKNNGTAVTTETETENKTEPTWVHDIFQGTLT
NETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEYKYYCETCCSKQE
AQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYD
LVAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESG
YILFYQSRE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcagaaacatcgcctccatttgtaatatgggcaccaatgcctctgctctggag
aaagacatcggcccggagcaatttccaatcaatgaacactactttggattggtcaacttt
ggaaacacatgttactgtaactcagtgctccaggctctctacttctgccggcctttccgg
gagaacgtgctggcctacaaagcccagcagaagaagaaggagaacctgctcacatgcctg
gctgacctcttccactccattgccacacagaagaagaaagtgggcgtcatcccgcccaag
aagttcatctcccgcctacggaaagagaacgatctgttcgacaactacatgcaacaggat
gcccacgaattcctcaactacctgctgaacactgtggctgacatcctgcaggaggagaag
aagcaggagaagcagaacggacgcctcaagaacaatggcactgctgtcactacagagacc
gagacagagaacaagaccgagcccacatgggttcacgatatcttccaaggcacactgacc
aatgagacgcgctgcctcaactgtgaaacggtgagcagcaaagatgaggattttctggat
ctttctgtggatgtggagcagaacacatcaataacacactgtctcagggacttcagtaac
acagagactttgtgcagtgagtacaaatactactgtgagacgtgctgcagcaagcaggaa
gcacagaaacggatgcgtgtgaagaagcttcctatgatcctggcactacacctgaagagg
tttaagtacatggagcagctgcaccgctacaccaagctgtcctacagagtggttttcccc
ctagaactccgtctgttcaacacgtctggggatgcagtcaacctggatcgcatgtatgat
ctagttgctgtggtggttcactgtggcagcggcccgaatcgaggtcattacatcaccata
gtgaagagtcatggcttctggctgctgtttgatgatgacattgtggagaaaattgacgcc
caggccatcgaggagttttatgggcttacctcagacatctccaagaactctgagtcggga
tacattctcttctaccagtccagggagtga
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