Lates calcarifer (barramundi perch): 108878933
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Entry
108878933 CDS
T04895
Symbol
nhsa
Name
(RefSeq) LOW QUALITY PROTEIN: actin remodeling regulator NHS
KO
K24144
Nance-Horan syndrome protein and NHS-like proteins
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108878933 (nhsa)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
108878933 (nhsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHS
Motif
Other DBs
NCBI-GeneID:
108878933
NCBI-ProteinID:
XP_018525498
UniProt:
A0AAJ7LK06
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All DBs
Position
LG17:complement(5472444..5527122)
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AA seq
1514 aa
AA seq
DB search
MPFAKRVVEPQLLCRYQIPNEEGLVFEDLVSISNVALSRTLRQLSDLAKHACSIFQELES
DLTSTNLRVRGLQSKINQLQQTCSELDPKQEAVPVSNLDVESKLMTHYQAPWHQQRNVFH
PSTRPVCVEELHRQANLSLWTLHRDHQRRQSGSRERRVTISISAVPPMPMYPSPHIIQRQ
EKRGTNLTTFESTRSSSPTECCRFSPWSRKAAPSDPDTDGVALGHRSKFPIPNIPSTLDK
QTNWSKALPLPTPEERMKSNSQVITSCVIPINVTGVGFDRDASVRCSLVHSQSVLQRRRK
LRRRRTVAGVPRQVQHDLDSDDSPSSRERTVIVHASPDITPSSEELASHLSTRDSGCQTE
DFLISGAPSRRRIRAQRVQGVSVSLSHSAGNISSLPDSADTMFTASVGARLRSRSLPRDG
SRMMDNGHNDSDEEEELSPFDTEDFLPGPGELILKDEGESTDDQAVSELQLGLKYKQLSE
SPERSWMERTRSQLPRKVDMGSCEISSSSDTFSSPVHSVSAAGVLGGPMDHKEDHQSSSG
NWSGSSSTCPSQTSETIPPAASPPLTGSSHCDSELSLNATTHNNDDQQTGFMLDHYQGLR
TQRAGSFSSTAMDILEEAGVSTPIENEWSYPNPEPPRPQDFSPEPNREAESSLGCPSFTS
MATCESSYSDKPPSEKADTVSHYSVDTEGYYTSMHFDCGLKGSRSFTYNYAAPGSDCGLS
DLSGHMTLGRRCLSLRKPKVKPSPPKRSSSLRKICSDGNIPDKKEPKITCGQQLPLSSKE
RKLQLVLSSSPGHIENSSLTRDPPLVWGVECSADLPDLGIFSSTDAHSFKDDGVVQSDYA
DLWLLNDLKSSDPYRSLSNSSTATGTTVIECIKSQESSESQTSQSGSRATTPSLPSVEGE
FKLTSPEKLAGLASPSSGYSSQSETPTSSFPSAFFPGPLSPSSGKRKPKVPERKSSLSSL
SLQSLSCRDGATSKRDLELPIIPPSHLDLSALQSVNKASAYRNQIQILHQNKQKAAASAK
AAAPTTSEVFNAHSMSITPTVLHSVQLRSISKEPEGGHEDKTASKLKCPTVNLKSTLSSS
KSLELKSPPLYNSHHHHTSSTELYESMFTSNEELTCGEAACQSETRNKQDRGAPLESMIA
YRLQSEPTADIPEPITSQEGEMCRESAETLVCSEDSSSQSEPLQQQRTEPPEEQTCSSPS
LKRSDSLDKVPATDGQSESLQVSPISNEEEYESSGVLAESASQDGKEESTPETEDYFSKD
STPSDNAVSPVTDESRPQDDRVFLSPTKTRTTEDLFAMIHRSKRKVLGRKDSAELGVRNR
LSAASGNTPPSSTTSSTMSSPVSVASPSSAVTPPGLQRVPGPIYRNAKKSSTSNEEFKLL
LLKKGSRSDSSYRMSATEILKSPINPKSAGDSLTELPRQSEELASPLQQQQLNSGPEQLS
SPYPKANAEGFSPKSFPTSAASRQGRSRIPPPANSSRYGMRSRLYSAPMQAISEGETENS
DGSPHDDRSSQGST
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgccatttgccaaacgagtcgtggaacctcaattactgtgcaggtatcaaatcccaaac
gaggagggtctagttttcgaggatctggtctccatcagtaatgtggctctgtctcggacc
ttgcggcagctatcggacctggccaaacatgcctgctccatattccaggagctggaaagc
gacctcacctccaccaacctgcgggtcagggggctgcagagtaagattaaccaacttcag
cagacctgctccgagctggaccccaaacaggaggcagtgccggtgtcaaacctggatgtg
gagagtaagctgatgacgcattaccaagctccctggcaccagcagaggaatgttttccac
ccctccacgcggccagtatgtgtagaagagctccacaggcaagccaacctcagcctgtgg
accctgcaccgagatcaccagaggagacaatcaggcagcagggagcggagagtgaccatc
tcgatctcagctgtgcccccgatgcccatgtacccctcccctcacatcatccagagacaa
gaaaagaggggcacaaatttgacaacgtttgaatccacccgctcctcctcccctaccgaa
tgttgccgcttctctccctggagcagaaaggctgcgccctctgaccccgacactgacggg
gtggctctaggtcaccggtctaagtttcccatccctaacatcccctcaaccctggacaag
cagactaactggtctaaagccctgccgctgcccaccccagaggaaagaatgaaaagcaat
tcccaagtcatcacctcatgtgtcatccccattaatgtgaccggggttggctttgacaga
gatgctagtgtgcgctgctcgctcgttcactcacagtctgtgcttcagaggaggaggaag
ctgaggagacggaggactgtcgctggcgttcccagacaggtgcagcacgacttagactct
gatgactctccaagttccagagagcgcacagtgatagttcatgccagtccagatatcacg
ccctccagtgaggagctggccagccatctcagtaccagagactcaggttgccaaacagag
gactttctgatctcaggagcgccatctcggaggaggatcagggcccagagagtccaggga
gtctccgtctccctctctcactctgcaggcaacatctcctccttgccggacagcgctgac
accatgttcaccgcctctgtgggagcacgcctgcgttccaggagtctgccccgagacgga
agccggatgatggacaacggccacaatgacagcgatgaggaggaggagctctcccccttc
gacaccgaggacttcctgcctggaccaggggagttgattctgaaggatgagggggagagc
acagacgatcaggctgtgtctgaactccagctgggcctcaaatataagcagctctcggag
agtccggagcgcagctggatggagaggaccagatcacagctgcccaggaaggtcgacatg
ggcagctgtgagatctcatccagttcagacaccttcagtagccctgtccactccgtctca
gctgcaggggtgcttggaggcccgatggaccataaggaggaccatcagtcttctagtggc
aactggagcggcagcagctctacctgcccctcacagacctcagaaacaatcccccccgca
gcctctccaccgctgactggctcctcacactgtgactctgaactctccctaaacgctacc
actcacaacaacgatgaccagcagaccggcttcatgctggaccactaccagggcctcagg
acccagcgggcaggctccttctcctccacagctatggacatattagaggaagcaggggtc
agcactcccatcgagaacgagtggagctaccccaaccccgagcctccgcgcccgcaggac
ttcagccccgagccgaacagagaagctgagagcagcctgggctgccccagcttcaccagc
atggccacctgtgagagcagctactctgacaagccaccgtcagagaaggcagacaccgtc
tcacactactctgtagacactgaaggctactacacctccatgcactttgactgtggtctc
aaaggtagcagaagcttcacttacaactatgcagcccctggctctgattgtggcctgtct
gacttgagtggtcacatgactctggggagacgctgcctctctttacgaaaaccaaaggtg
aagccgtctccacctaagaggagttcatccttaagaaaaatatgcagtgatgggaacatc
cctgacaagaaagaaccaaagattacatgtgggcagcaacttccactgtcttccaaggag
aggaaactgcagctggttttgtccagctctccaggtcatatagaaaactcttcactcacc
agagatccccctctggtctggggagtggagtgctcagctgatctacctgatttaggcatt
tttagctccacagatgcacattcatttaaggacgacggggttgtgcagtcagactatgca
gatctgtggctgctgaatgatttaaaatccagcgatccctaccgatctttgtcaaactcc
agcacagccacaggcacaactgtcattgaatgcatcaagtcgcaagagagctcagagtcc
cagacatcccagtctggctccagagccaccactccctcacttccatcagtggagggtgag
tttaagctcacctctccagagaagctggcaggcctggccagcccgtccagcggctactcc
agtcagtcagaaacccccacctcttcgttcccctccgccttcttccccggaccactgtcg
ccatccagcggcaagaggaagcccaaagtcccggagaggaagtcgtctctttcgtcactg
tcactgcagtcactgtcctgcagggacggagccacctcgaagagagacctggagctgccg
ataatccctccctcccaccttgacctaagtgcccttcaaagtgtcaacaaggcctcagct
tacaggaaccagatccagatccttcaccaaaacaaacaaaaagccgcagcatcagccaag
gctgcagcacccaccacctcagaggtgtttaatgcccactccatgtccatcacacccaca
gtgctacactcagtccagctccgatccatcagtaaagaacctgaaggaggtcatgaggac
aaaacagcttccaaactcaaatgtcccacagtgaacttaaaaagcacattgtcaagtagt
aaatctttagagctaaagagtccaccgttgtacaactcacatcatcatcacacatcctca
acggagttgtatgaatcaatgtttacctcaaatgaagagctcacgtgcggagaagcggcg
tgtcagagtgagacgaggaacaagcaggacagaggggctcctttagagagtatgatagca
tacagactgcagtcagagccaacagcagacatccctgagcccatcactagtcaggaagga
gagatgtgcagagagtcagcagaaacgcttgtctgctctgaagactccagctcacagtca
gagcctttacaacagcaaagaactgagccccctgaagaacaaacgtgttctagtccttct
ctcaagagatccgacagtcttgataaagtgcctgctactgatggtcaatcagagtcgctg
caagtgagtccaatcagtaatgaagaggagtacgagtcatcaggtgttttagccgaaagt
gcctctcaggatggcaaggaggagtccacaccagagacagaggattacttcagtaaagac
tccacacccagtgacaatgcagtgtccccagtgactgatgagtcaaggccacaggacgac
agggtgtttctgtcacccaccaaaactcgcaccactgaggacctgtttgctatgatacac
aggtccaaaaggaaagtgttgggtaggaaggactcagctgaattgggtgtgaggaatcgc
ctcagtgctgcatcaggaaatacaccacccagcagcactaccagcagcactatgagctcc
ccagtctcagtggcgtcaccctcctctgctgtgaccccaccaggtctacaaagagtccct
gggcccatctacaggaatgccaagaagtccagcacctctaacgaggagttcaaactgctg
ctgcttaaaaagggcagccgctcagactctagttaccgcatgtcagctacagagatcctc
aagagccccatcaaccctaaatctgccggagactctctgacggagttgcccagacagtct
gaggagctcgcctcccccctgcaacaacagcagcttaattcaggaccagaacagctctcc
agcccttaccccaaagcaaatgctgagggcttctcaccaaaatccttcccaacatctgct
gcttccaggcagggccgctccagaatccctccgcctgccaacagcagccgctatggcatg
cgcagcagactgtactcagcacccatgcaggccatttctgagggcgagaccgagaactca
gacggaagtcctcatgatgaccgctcatcacagggctccacgtag
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integrated database retrieval system
