Lates calcarifer (barramundi perch): 108878943
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Entry
108878943 CDS
T04895
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108878943
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
108878943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
EGF_3
EGF_Teneurin
cEGF
EGF_MSP1_1
FXa_inhibition
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
108878943
NCBI-ProteinID:
XP_018525527
UniProt:
A0AAJ7LK54
LinkDB
All DBs
Position
LG17:4202123..4226777
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AA seq
1398 aa
AA seq
DB search
MVLVLRALLPCLCTLLSLDLLPGVEPAVPLEDFYPFGQDKGDSQTIAQDDGGSGLVEISV
AFPFFGDRHTGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRRAGRVFY
RESQEPSILRRASGDVRTYFPEYPDYNATWVLISTWHQVTFFGGNSLTPVNTFQVVLITD
GELSFTIFQYNNITWTTGMHASSGGNLAGLGGIAAQAGFNAGDGSRYFNIPSSRTADVVN
VEGTTNVGYPGRWVFRIDDSHVEVGGCNNSASVCPHLRPCLNGGQCIDDCITGNPSFTCS
CLAGFTGRRCQIDVDECASYPCQNGGTCKDRINSFICQCPPGYTGILCETDIDECKDRPC
LNNALCVRGAGSFTCVCEPGYTGVLCETDINECESQPCLNRGECVDQVANFTCICPATFT
GMLCETELVEPQVNLTEAENQTALCEEDDCKKQQICEYTSSGIYNCTCAPGFYGDKCEEE
CLCQNGGVCVDINGTCECPSGYTGLYCQFEVTQTPCSNSRPCPDGGPCLEYGGTYLCTCQ
TSGAELDHKDFYPYVQPRSVCDSSPCLNGGYCYERDGGYSCECKYGYWGKHCEKVRLNTC
ASGPCRNGGSCKEEAGSYRCVCPYRFTGKHCEVGKPDPCASSPCLNGGTCFHYIGKYKCE
CTEAFSGRHCEISRSLVQHPAELNCGPPPQVKHAEVQFSSITPGSIAVYVCHSGFTSVPR
ATQSICGIQGDWSQPPICEEINECLSQPCLNGGTCQNQVGSYQCVCNEGFSGSRCQTEIN
ECLSEPCKHGGTCEDQPGSYVCHCPQGFKGQNCEIEQDACESNPCLNGGVCRGYRRHYLC
VCKDGFFGDQCQMLEDPCVLQLCGNRGVCRTDRRGNYNCVCKTGYTGKDCEKDLLPPSGL
HVLRVEENEVELRWDEPEPSQSLISGFAVTYAPLGWSDSKTDYLDRHQSTHVMRGLVPGL
LYNISTFSIKRSSNNRKDSSQPATALIRTRPRRVEQLQVVNVSSSQVWLSWLIQAARHAA
ASRVHVSLLPSDGSEARTAVLNTSTTEYTFSSLLPGQTYTVDVLTQSGIRPDEFPSTSHS
AGPLQFWTRPLPPQNLSLSHVTTNSALITWSRHPRNVPDGFVVNVTRGLNTRSRFLPNGK
LGSYTLRELTPGQHYYVALTSVKNTGQEQIHSIPQHLAFTTLPMEARSSRRERPTGTGQR
TQVGLTPPPSQPQDLGGTTETGNSEELPRYTELIDRRGKITAKFTHLPRKTIRHRNKPDP
PIRLEKMEETTNKISLALEIQEEGLKTKPELPLDCRNLPCQNGGTCMNEGDSFICECAAG
FKGRQCELLCQRVPHPCTRLYSETKSVPVWEGGVCHYLYKRTYKVQQDVCYREICEPVLP
KKSQEHLDTEERTVITVM
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggtgctgcgagccctgctgccctgcctctgcaccctgctctccctggacctg
ctgccgggggtggaacctgctgtgcccctagaggacttctatccctttggccaggacaag
ggggactcccagaccattgctcaggacgacggaggctccgggcttgtggagatctctgtt
gctttccccttctttggagacaggcacacgggactctatgttaacaacaatggccttgta
tctttcctgagggaggtgtctcagttcacacccgtagcttttccaattgctggagacagg
agggttgtagcaccattctgggctgatgtggacaaccgccgggctgggagagtcttctac
agagagagccaggagccttccatcctgagaagggcctcaggtgacgtcaggacgtacttc
cctgagtaccctgactacaatgcaacatgggtcctcatctcgacatggcatcaagttact
ttctttggaggcaactccctcacaccggtaaatactttccaagtggtgctcattacagac
ggagagctttccttcactatattccagtacaataatatcacttggaccacaggcatgcat
gccagcagtggaggaaacctggctgggctaggaggaatcgcagcacaggcaggtttcaat
gcaggtgacggcagtcgctatttcaacatccccagctctcgcacagctgatgtggtgaac
gttgagggaaccaccaatgtgggctacccaggcagatgggtcttccgcatagacgattca
catgtagaagtgggtggctgcaataactccgcatccgtgtgcccacacctgcgaccatgc
ctgaatggaggccagtgcattgatgactgtattacaggcaacccctccttcacttgctcc
tgcttggctggcttcactggtcggcgatgccagatcgatgtcgatgaatgtgcctcatat
ccttgtcagaatggagggacttgtaaagaccggattaacagtttcatctgtcagtgtcct
cctggatacactgggattctgtgtgaaacagacattgacgagtgcaaagacagaccgtgc
ctcaacaacgcgttgtgtgtacgaggcgctggcagtttcacctgtgtgtgtgaaccaggt
tacactggtgtcctgtgtgagacagacataaatgaatgtgagtcgcagccctgtctgaat
agaggagagtgcgtcgatcaggtggccaacttcacctgcatttgtcctgctaccttcact
ggaatgctctgtgagacagaactggtggagcctcaggtcaatttaactgaggcagaaaac
caaacagccttgtgtgaagaggacgactgcaagaagcaacagatttgcgaatacaccagc
tctggaatctacaactgtacatgcgctccaggcttctatggtgacaagtgtgaagaggaa
tgtctttgccagaatgggggtgtctgtgtggacatcaatgggacttgtgaatgcccttca
ggctacacaggactctactgtcagtttgaagtaacccagacgccctgcagtaacagcagg
ccgtgtcctgatggaggtccttgtttggagtatgggggaacctacctgtgtacatgtcag
accagtggagcagaactagatcataaggacttctacccgtatgtacagccccgatcggtc
tgtgactcctctccgtgtctgaatgggggctactgctacgagcgggatggaggctattcc
tgcgaatgcaaatacggatactgggggaagcactgtgagaaagttagactcaatacctgt
gcatctggtccctgccgcaatggaggttcctgtaaggaagaggcagggagctacagatgt
gtgtgtccttacaggttcactggaaaacactgtgaagtggggaagccagacccctgtgcc
tctagcccctgtctaaatggggggacatgttttcactacataggaaagtataaatgtgag
tgcactgaggccttcagcggcagacactgtgaaataagcagaagcttagtacaacatcct
gcagagctgaactgtgggccgcccccacaagtgaagcatgccgaagtccaattctcctca
ataacaccaggctccatcgctgtatatgtatgccactcaggcttcacgtctgtacccaga
gccacccagagcatctgtggcattcagggagactggagccagccacccatttgtgaggag
atcaatgagtgcctatcacagccttgccttaatggtggtacatgtcaaaaccaggttgga
tcttaccagtgtgtctgtaatgaaggcttcagtggaagtcgctgtcaaacagaaataaat
gaatgcctgtcggaaccctgcaagcatggggggacatgtgaggaccagcctggctcctac
gtgtgccactgtccacaaggtttcaaaggccagaattgtgaaatagagcaggacgcatgt
gagtccaacccctgtctaaatggaggtgtgtgtcgaggatacagaaggcattatttgtgt
gtgtgcaaagatggtttttttggggaccagtgccagatgttggaagacccatgtgtactg
caactttgtggaaaccgtggtgtctgcaggactgacaggagaggaaactacaactgtgtt
tgcaagacaggatacacaggcaaagactgtgagaaagacctgttgcctccctctggtctc
catgtgctgcgtgtggaggagaacgaagtggaactgcgctgggatgagccggagccctca
cagagcctgatcagtgggttcgccgtcacctatgctcccctgggctggagtgattccaaa
acagattacctggacaggcaccagtccacccacgtcatgagaggcctggtccccggccta
ctgtacaacatctccaccttctccatcaaacgcagcagcaataacagaaaagactccagt
cagcctgcaactgcactaatacgcaccaggcctcggcgggtggagcagctgcaggtggtc
aatgtgtcctcatctcaggtttggctgagttggctgattcaggcagctcgtcatgcagca
gccagcagggtgcacgtgtctttattgccctcagatgggagtgaggctcgcactgcagtg
ctcaacacgagcaccactgagtacaccttcagttcattacttcctggtcagacgtacaca
gtagacgtcctgactcaaagtggaatcagaccagatgagtttccctccaccagccactca
gctggaccactgcaattttggacaaggcctctacccccacagaacctctccctgtcacat
gtgaccactaactcagcactgatcacctggagccgccacccaagaaatgtcccagatggc
tttgtggtcaatgtgacccgagggttgaataccaggagtcgcttcctgcccaatgggaag
ttaggatcatataccctccgtgaactgacgccaggacagcactactatgtggctctcaca
tcggtcaaaaacacagggcaggaacagatccacagcatacctcagcacttagccttcact
accttgccaatggaggccagatcatcaagaagagagaggccaacagggactggacagcgg
actcaagttggcctcacacctcccccatctcagcctcaggacctgggaggcacaacagaa
acaggaaactcagaggagttgcccagatacacagaactcattgacaggaggggaaagata
acagccaagttcactcacttacctcgaaaaaccattcgtcatcgtaataaacctgaccca
ccaattagattagagaagatggaagaaacaacaaacaaaatcagccttgcactagagatt
caagaagaaggtttaaaaacaaagcctgagttgcccttggactgccgcaatctgccctgc
cagaatgggggtacatgtatgaacgaaggtgactccttcatctgcgaatgtgcagcaggg
ttcaaaggcagacagtgtgaactgttgtgccagcgagtgccgcacccgtgtacccgtctc
tactctgaaacgaagagtgtgcctgtctgggagggcggagtctgccactacttgtacaaa
agaacatataaagtacagcaggatgtctgttatcgagagatttgtgaaccagtgctccca
aagaaaagtcaggagcacttggatactgaggaaaggactgtcatcactgtcatgtga
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