Lates calcarifer (barramundi perch): 108878952
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Entry
108878952 CDS
T04895
Symbol
ube3a
Name
(RefSeq) ubiquitin-protein ligase E3A isoform X1
KO
K10587
ubiquitin-protein ligase E3 A [EC:
2.3.2.26
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108878952 (ube3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108878952 (ube3a)
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108878952 (ube3a)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
HECT type E3
108878952 (ube3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
AZUL
Motif
Other DBs
NCBI-GeneID:
108878952
NCBI-ProteinID:
XP_018525542
UniProt:
A0AAJ7LK51
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Position
LG17:complement(4832176..4841071)
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AA seq
840 aa
AA seq
DB search
MNRATAKHLIERYFRQLTEGCGNGNCTNEFCASCCDFQPLDNNSAAAKALELFKINAKLC
PHPSKKESDTSHPDSSADENTQLDSNMSDKDLFPPKEDFSDVHYLTENTVCMILSVCEEK
GDYSALIRVIGRVFSNAEALMKSFRKNEPNTTENLGSCTPTDGNEQEKHSEQPPEKMGAS
SAAALPNESPNEMFNPCEVTVDIDAVRRVYDRLLTIDQVETALVNALVYLTPNMELDLEY
LDVYETNPDYLNIFIIVMENSNLHSPEYLEVALPQFCKAMSKLPVTALARLSKLWSTYSL
PHIRRMMETFQQLITFTVVSNEYDAENLVNDDETVVAATQCLKIVFYASILGGDVDIEHN
EEDEEDEESDELTLHELLGEERLYKKSPRIDPLEKELGVRPIDSRRPLIPSEDFINESLN
DVVEMDKDFTFFKVNAETKFSFQSCPFILNVITKNQGLYYDNRIRMYSERRLTALYSMVQ
GQQPNPYLKLKVRRDHIIDDALVSLEMISMENPSDLKKQLFVEFEGEQGVDEGGVSKEFF
QLVLEEIFNLDIGMFTYDEDTKLFWFNSSSLENEAQYTLIGIVLGLAIYNNCILDVHFPM
VVYRKLMGKKGTYLDLSDSHPALYQSLKGLLEYTGNVEEDMMLTFQISHTDLFGNPILYD
LKEQGDQIPVTKENRQEFVDLYAEYILNKSVERQFRAFKKGFLMVTNESPLKYLFRPEEV
ELLICGSRKLDFEALEKTTEYDGGYSKDSQIIKDFWETIHSFREEQKRLFLQFTTGTDRA
PVGGLGKLKMIIAKNGSDTDRLPTSHTCFNALLLPEYSSKEKLKERLLKAITYAKGFGML
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagcgactgcaaagcatctaattgagcgctactttcggcagttaactgagggc
tgtggaaatggcaactgcacgaatgagttttgcgcatcatgttgtgattttcaacctttg
gataacaattcagctgctgccaaagcacttgagctgtttaagattaatgccaaactctgt
cctcacccctccaagaaagaatctgacacctcccacccagactccagtgctgacgaaaac
actcagctggacagtaatatgagtgataaggacctttttccccccaaggaggacttctca
gatgtgcattacctcacagaaaacactgtatgtatgatcctgagtgtctgtgaggagaaa
ggggactactctgctctcatccgtgtcattggcagagttttctccaatgcagaagcgttg
atgaagagttttaggaagaatgaaccaaacaccactgaaaacctgggctcttgtacacca
acagatgggaacgagcaggagaagcacagtgagcaacccccggaaaagatgggtgcctcc
tctgcagctgctttaccaaatgagtctcctaatgaaatgtttaacccctgtgaggttact
gtggacattgatgccgtgaggagagtctatgacagacttctaaccatcgaccaggtggag
acagctcttgtgaacgcacttgtttacctcactccaaatatggaacttgacctggaatac
cttgatgtatatgaaacaaacccagattacctgaacatcttcatcattgttatggagaac
agtaatcttcacagtccagagtaccttgaagtggctttgccacagttctgcaaggcaatg
agcaaactgccagtgactgcacttgcaagactgtcaaagctctggtcaacgtacagtctc
ccacacatccgccgtatgatggagaccttccaacagctcatcactttcacagttgtcagc
aatgaatacgatgctgagaatctggtgaatgatgacgagactgtggtggctgcaacccag
tgtttaaagattgtcttctatgcaagtatcctgggtggtgacgtggatattgagcacaac
gaggaagacgaggaggatgaggagtccgatgagctcaccctgcatgaactgctaggtgag
gagcggctctataagaagagtcctcggattgatcctttggagaaagaactgggagttcgg
cctatcgatagcagaagacccctcatcccctctgaggattttattaacgagtcactgaat
gacgtagtggagatggacaaagatttcaccttcttcaaagtcaatgctgaaactaagttt
tcttttcagagctgccccttcatcctcaatgtcatcaccaagaaccaaggactgtactat
gacaacagaatcaggatgtacagcgagcgacgcctcaccgccctctacagcatggttcag
ggccagcagcccaacccctatcttaagcttaaagttcgcagagatcacatcatcgatgac
gccctcgtcagcctggagatgatttccatggagaacccatcagacctgaagaagcagctg
tttgttgagtttgagggggagcaaggtgtagacgaagggggcgtatcaaaggagttcttt
cagttggtcttggaggaaatcttcaatctcgacataggaatgttcacctacgacgaggat
acaaaacttttctggttcaattcatcctcacttgagaatgaagcacagtacactcttatt
ggaatcgtcctagggctcgccatttacaacaactgcattctggatgtccatttccctatg
gttgtctacaggaaactcatgggcaagaaagggacctacttggacctgtcagactcacat
ccagctctctaccaaagcctgaagggattgcttgagtatactggcaatgtggaggaagac
atgatgctcaccttccagatatcacacacagatctttttggaaacccaatattgtatgac
ttgaaggaacagggagaccagatccctgtaaccaaggagaatagacaggagtttgtggat
ctgtatgctgaatacatactgaacaagagtgtggagagacaattcagagccttcaaaaaa
ggtttcctcatggtcacaaatgagtccccactgaaatatttgtttagaccagaggaagta
gagctccttatttgtggaagcaggaaacttgactttgaagcacttgaaaagaccacagaa
tatgatggaggctatagcaaagatagtcaaattatcaaagatttctgggaaacaattcac
tcatttagagaggagcagaagaggttgtttcttcagtttaccactggcacagacagagca
ccagttggtgggcttggcaaattaaaaatgattatcgccaagaacggctcagacacagac
aggctaccaacttctcacacatgctttaatgctctgctgctcccagaatactcctccaaa
gaaaaactgaaagaaagactcctcaaggccatcacttatgccaaaggatttgggatgctg
tga
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