Lates calcarifer (barramundi perch): 108878989
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Entry
108878989 CDS
T04895
Symbol
znf644b
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein 644
KO
K24374
zinc finger protein 644
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108878989 (znf644b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108878989 (znf644b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
108878989
NCBI-ProteinID:
XP_018525601
UniProt:
A0A4W6D0I1
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Position
LG17:3354182..3380303
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AA seq
1224 aa
AA seq
DB search
MSDLKPNVQEDKDVESVSASPGRTQEPLQSHTFSLKNNAAGLSSDEHENPLNGTQPNPFV
YSSVPAVPHTGNSLPSGALVNGPGSHPTCVXVHCVLNKGTVLSNNVLDAVWQVEKDTSPE
VLPPPSELQSDAWKNTAGPAVKTLATQPGVNTPQSHLEENESKLAYSTLSGDSAEQMHIS
HPCTKQTIEAGSHRSAEWSESSSDDYDDVEVIRWDLARECFLHNNRSLETKVMHQRDMQH
NTHVKSMAGSLEKVNNSLNHRDRRFCSGNDVENIDLANKDNSLDTESGGKYSVVPFNNPS
RNTALDSEHHIYSAAQEGCNEENDPEDEDSFSPKVEQLKTEQLEQDPSFFSCTVCNVNFK
EKRNFHRHMMYHLGKHNQVNSENVSQTFICRECGRLFCDSNSLMRHIIIHRDRLEKLMEE
IKGLKNTEFEDRGTTVQCPQCVFECNCPKIFVQHAKTHDNLKHYYFCEECNYITLTQQAL
ELHLHVAHLNSHQPQHEKMTHTNDAEEADHVQFQCKMGFFTSRDRAVLERHSEMEDQQSH
YGNYKKFADHPEIAGCTPDLCKSAFGETAHSPHYSRRKGDIYVQKSNDKKGNTPQLMCHA
GCTKKTPSLWRINKNGKLLLQAVEKLDVATDLTCVEEDTERNDLKAFGSSKQANCPATAD
FLLSARNLKLDQMFCQGSKNDLESRSLQAQANQNSPSMRKMSTPLHNSIDSMNGNILPRL
SQRHKKQSAVRELENGCEGGHNFSDDTSKATGSFLESSENESNPYARKYFRKRQRFSTID
QSPHILKDEDGGDEDCSDIEQLIIKEEYIETTVCDNSPESPCTSTSDSFDVFPSQVVEHK
PCPYCPAMFESGVGLSNHVRGHLHRVGLSYNARHMVSPEQVALRDHQPRTRRRIRTGSRK
MRKAVKPETQGEHTCPLCWGWFDTKTGLSNHVRGHLKRIGRSITSTSKSPLCILNELLQD
KKEHRNILQVLNKSRFPQQPSVSQKFISSSGLVLMRAALPVKIQYEMRSPHPIGDRLVPK
QEEHAFSESSKAQTGIKASSSTLVELLKTRGDSMELTARNDQDAYATRKLCGMTKEYREE
TQITSVEPNWTRGECDSDKICIHCNSNIPTAVNLSGHLQAYACRKRIAVFEEPGYDYKQK
KPRPRPGLKKKILPCLNAQIYTLTCRFCDLVFQGPLSIQEDWIKHLQRHLLHTNVPHSGT
GMVEVLGLHHKIEISMSHEHPDFM
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatctgaagccaaatgtacaagaggacaaagatgtggaatcagtgtctgccagc
ccgggtcgtactcaggagccattacagagtcacacattctctctgaaaaacaatgctgca
ggtctgtcctcagatgaacacgaaaaccctttaaatggaacccagccgaatccatttgta
tacagcagtgtccctgctgttccccacacaggcaattcattgccttcaggagcacttgtt
aatggacctggttcacaccccacctgtgtctaggtacactgtgtcctgaacaaaggcact
gttttatccaacaatgtcctggatgccgtgtggcaagtggagaaggacacgagccccgag
gtgttaccaccacctagtgagcttcaatcagacgcttggaagaacacagcggggcctgct
gtaaaaacactggccacacagccaggtgtcaacacgccacagtctcacttggaggagaat
gagtctaaactggcctattccacactgtcaggtgacagtgcagagcaaatgcatattagc
catccttgcacaaaacagacaatagaagcaggatctcaccgcagcgctgaatggtcagaa
agctcctctgacgattatgatgatgttgaagtaatcagatgggatttggcaagagagtgc
ttcttgcacaataacagaagcttggagaccaaagtgatgcaccaaagagacatgcagcac
aatacacatgtaaaaagcatggcaggctctctagaaaaggttaacaacagcttgaatcac
agagacagacgtttctgcagtggtaatgatgttgaaaatattgaccttgccaacaaagac
aattctttggacacagaatctggtggtaaatactctgttgtgccattcaacaatccttct
aggaacacagctttagactctgagcaccatatttatagtgcagcacaggaaggctgtaat
gaggaaaatgaccctgaagatgaagacagttttagtccaaaagtggaacagttgaagaca
gagcaacttgaacaagatccgtccttcttttcatgcacagtatgcaatgttaatttcaag
gaaaaaagaaatttccatagacatatgatgtatcatttaggcaagcataatcaggtgaac
agtgagaatgtttcacagacctttatatgcagggagtgtgggcgtttgttctgtgatagc
aactccctcatgaggcacatcattattcaccgagacaggctggaaaaacttatggaggaa
atcaaaggtctcaaaaacactgaatttgaagacagaggcaccacagtacagtgccctcag
tgtgtgtttgaatgtaactgcccgaaaatctttgtccagcacgccaaaactcatgataat
ctgaagcactactacttctgtgaggagtgtaactacattacactcacacagcaggcactt
gaactacacttacatgtcgcacaccttaactcacaccagcctcaacacgagaaaatgact
catactaatgatgcagaggaagcagaccatgttcagttccagtgtaaaatgggttttttc
acaagcagagacagagcagtattggaaagacattctgagatggaggatcagcaatcacac
tatggtaattataaaaaatttgcagaccaccccgaaattgctggctgtacaccagatctg
tgtaaatctgcttttggagaaacagcccattcaccccactattccagaagaaaaggggac
atttatgttcaaaagtctaatgacaaaaaaggtaatactcctcagttaatgtgccatgct
ggctgcaccaaaaaaacaccgtctttgtggaggatcaacaagaatggaaaattactccta
caggcagtagaaaaattagatgtggcaactgatctcacctgtgtggaagaagacactgaa
agaaatgacctcaaggcttttggcagctcaaagcaggcaaactgtcctgctactgctgat
tttttactatcagccagaaatcttaaattagaccagatgttctgtcagggtagcaagaac
gacctggaaagcaggagtttacaagcgcaagcaaaccaaaattctccatcaatgagaaaa
atgtcaacacctttgcataactctattgacagtatgaatggtaatatattgccaaggctt
agccagaggcataagaaacagtctgcagttagggagttggagaatggttgtgagggcggc
cataacttcagtgatgacaccagcaaagctacaggcagcttcttggaaagcagtgagaat
gaaagcaacccatatgctcggaagtatttcagaaagaggcagaggttttcaaccatagac
caaagcccccatatactcaaggatgaagatggtggagatgaagactgcagtgacatagag
caactcataatcaaagaggagtatatcgaaactacagtgtgtgataattccccagagtca
ccttgcacgtctacaagtgacagttttgatgttttcccctctcaagtggtagaacacaag
ccctgtccatactgccctgccatgtttgagtctggagtgggtttgtccaatcacgtgcga
gggcatcttcatcgtgtcggcttgagctacaacgctcggcacatggtttcaccagagcaa
gtggcactgcgggatcatcagccgcgaacccgcagaaggatccggactggctcgaggaaa
atgaggaaagctgttaagccagaaacccaaggagagcacacatgtcccttgtgctggggt
tggtttgatactaagactggcctctccaaccatgtgaggggacacctgaaacgaataggc
agaagtatcaccagcaccagtaagtctccgctgtgcattctaaacgaactgctacaggac
aaaaaggaacatcggaacatcctccaggtcctcaacaagagccggttcccccaacaacct
tcagtctcacagaagttcatcagcagcagtggcctggtcttgatgcgtgctgcactacca
gtgaagatccagtatgagatgaggagtccacaccccataggagatagattggtgccaaaa
caagaggaacatgccttctcagagagcagtaaagcacaaacaggcattaaggcctcctca
agcactttagttgaactgctcaagacaagaggggacagtatggagcttacagccagaaat
gaccaggatgcctatgcaaccaggaagctctgtggtatgaccaaagaatacagggaggag
acacagatcacaagtgtggaaccaaactggactcgtggggaatgtgattcagataagatt
tgcattcactgtaacagcaacatccccactgctgtcaatctgtctggtcatcttcaagcc
tatgcgtgcaggaagaggattgctgtttttgaagaaccaggctatgattataaacagaag
aagccaagaccaaggcctgggctaaaaaagaagattttaccctgcttgaatgctcagatt
tacacactcacctgcagattctgtgacctcgttttccaggggcccctgtctatccaggag
gattggatcaagcacttacagaggcaccttctgcacaccaatgtgcctcactcagggaca
gggatggtggaggttttgggtcttcatcacaaaatagaaataagcatgtctcatgagcac
cctgactttatgtag
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