Lates calcarifer (barramundi perch): 108879018
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Entry
108879018 CDS
T04895
Symbol
tjp3
Name
(RefSeq) tight junction protein ZO-3 isoform X1
KO
K06097
tight junction protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108879018 (tjp3)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Guanylate_kin
SH3_2
Motif
Other DBs
NCBI-GeneID:
108879018
NCBI-ProteinID:
XP_018525645
UniProt:
A0A4W6D8R3
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All DBs
Position
LG17:complement(8064679..8085437)
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AA seq
1342 aa
AA seq
DB search
MNLTQRIKLLKHFGSVPPEPPPPLLVVPKPGMEELTIWEQHTITLNKDPKLGFGFAISGG
KDKPHPDSGDTAVVVSDVLPNGPAIGRLFNKDQIVMVNGTSMENVHSNYTIQILKACGKT
ANVTVKRPRKIQIPATTRPTRAASHSNLLDQDPPRQTRRYSDGSDNRDTYRYRARSSTPD
RNGHGNTLPLMSSGYKRLPQQDVAGRPIRTTLVKKKITDEYGLKLGSQIFIKHMTETGLA
AKEGTLQEGDLILKINGMTTENLSLLETKHLVEKSRGKLTMTVLRDDRKFLVSIPEVADS
APNSEDDRRQDSSSEFEDISDIDVDIPTHRTSRQPTREKRTRRTRAEPPPPKSRDASPVR
STLTRPPARTYASRRAPSESESDHSASPPPPVRRDRDRDRESDRDMRDQHSKYKSLSGMS
TLPNPRSSPVVHNWTTSRPTSSASRPRRPVSESDSDRSASPPPRRESPRPDNRYKVLPDL
PLPSLRASPIPVRQEGPRRVNSPVRIPSRDSESESDGSSAPPRRQSTSYNQDSLSRYRVL
PDVALQPQVEPPRWSATSDLPQKAPSESESEASYASVPRRESTDSGNSNTVNNRYRVLPE
MKSAPVSVKQEPPRRVQSPTRPPPDDSSESDQLSHLRRSGSSEREQNHRSVPRAANGTGT
LRSGISVKSNPPLYSKPAEEPIYSLPPDSYPSPNPGYSSDLHTVSFVKEGSVGLRLVGGN
DVGIFVGGVQPNSPAYEEGMKEGDQIMQVNKVDFGHFTREEAANFLLNIKKGERVEICTQ
NKMDLYKKIIKSNLADNFYIRTHFDHEAEGPIGLSFTRGEVFRVVDTMHRGKLGNWLAVR
MGNDLHEMDKGTIPNLARAETLASIEQAQRASGERQVSGPRAEFWKLRGLRGNKKNEKNA
RRTRDDLLQLTIQGKFPAYERVLLREANFKRPIVILGPLNDIAMEKLAREMPDEYEVAEM
VPRSGGGESASTVIKLDTVRKIAEKDKHPLLDITPTAVERLNYIQYHPMVLFLDPHSRKD
VKAMRQRYSPNSNKSSRRLYSQALKMRKHCSHLFSARVDLQPNSNIWYESLKDKIRHQQS
KPVWVSEVTLESGGEQDLDTLDQTQSDYLSAASDLEDTDGEAFTDGEAYTDNEELEEAYP
GQEAARDLRGYRGTGAALARSSEPASGHHSPSMDSEPHADSYSLREIPPLMHVPEPRSTR
QDNYSPAHSTAEEEDPSHRSFTDSDFSALDLVAPTTPSDGPPDFIAPDPTTRHSVNEPSY
AEAAPESPQHASLSAIEDKLQQARSAEPQAQPEDKKGPQFIVLAHHHQAVQFRRTQIRGS
DSSEDEEDEEEDDIEWGPATEL
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgacgcagcgaattaaactgttgaagcacttcggctctgtgcctcccgagcct
cctccaccacttctggtggtgcctaaaccaggcatggaggagttaacaatatgggagcaa
catacaataacactgaacaaggatcccaagctggggtttggttttgccatatcagggggc
aaggacaagcctcacccagacagtggggatacagctgtggtggtgtcagatgtgctgcca
aatggaccggccattggacgactcttcaacaaagaccaaatcgtcatggtgaacggaaca
tccatggagaacgtccactctaactacaccattcagatcctgaaagcatgtggcaagact
gcaaatgtaacagtgaaacgccctcgaaagatccagatcccagccaccaccagacccact
cgtgccgcctcccactccaatctgctggaccaggatcctcccagacaaacgcgacgctac
tccgacggcagcgacaaccgagacacgtatcgctaccgagcccgcagctccacgcccgat
cgcaacgggcacggaaacacgctgccgttgatgtcatcggggtacaagaggctgcctcag
caggacgttgcaggcagacccatcagaactactctggttaaaaagaaaatcacagatgag
tatggattgaagctgggcagtcagatctttatcaagcacatgacagaaacaggcctggct
gcaaaggaaggcacgctgcaggaaggagaccttattctcaagatcaacggcatgacgacg
gagaacctatccctgctggagaccaagcacctggtggagaagagcaggggaaaactgacc
atgacggtcctcagggacgaccgcaagttcctggtcagcatcccagaggtggcggacagc
gcccccaacagtgaggacgaccgtcgccaagacagcagctccgaatttgaggacatttca
gacattgacgtggacatccccactcacagaacatcccgtcaacccaccagagagaaacga
acacgcagaacaagagccgaacctcctcctcccaagtctcgggatgcatcacctgtgcgc
tccaccttgactcggcctcctgcgagaacctacgcctcccgtagagctccatctgagtca
gagtcagatcacagcgcctctcctcctcctcctgtcaggagagaccgagaccgagaccga
gaaagtgacagagacatgagggatcaacacagcaaatacaaatctctctctggcatgtcc
accctccccaacccccggtcctctcctgtagtccacaactggaccacctctcggcctacc
tcctccgcctcgcggccccgcaggcccgtgtcagagtcggactctgaccgcagcgcctcc
ccacctccacgcagggagagcccacgtccagacaacagatacaaagttctccctgatctg
cccctcccaagcctgagagcctcccctatccctgtccgccaggagggtccaaggagggtc
aactcacctgtcagaatcccgtcccgagactctgagtccgagtcggacggcagctcagct
cctcctcggaggcagagcacctcgtacaaccaggactccctcagcagatacagagtcctg
ccagatgttgccctgcaaccccaggtggagccgccacgatggagcgccaccagtgatctg
ccacagaaagctccttcagaatctgagtcagaggccagttatgcgtctgtccctcgcagg
gagtccacagacagcggaaactccaacacagtcaacaacagatacagagtccttcctgag
atgaagtctgctccagtctctgtgaagcaggagcctcctcgtcgtgtccagtcacccacc
agaccacctcctgatgattcctcagagtcagaccagctttcacatctcaggaggtctgga
agctccgagcgggagcagaaccatcgcagtgttcctcgagctgctaacggcactggcacc
ctcaggtctgggatttcggtgaagagcaacccaccactctactccaagcctgcagaagag
cctatctactccttgcctccagattcttacccatcacctaatccagggtacagctcagac
ttgcacacagtgtcattcgtgaaggagggcagtgtaggcctgaggcttgtggggggcaat
gatgtcggcatctttgttggtggagttcagccaaacagccctgcatatgaagagggaatg
aaagagggggaccagattatgcaggtaaataaagttgattttggccatttcacacgtgaa
gaggcggccaacttcctcctgaacatcaagaaaggagaacgagtggaaatttgcacccag
aacaagatggacctttataagaagatcattaagtccaatctggcagacaacttctacatt
cgtacccacttcgaccatgaagcagagggccccattggtctgagcttcaccagaggagag
gtgttcagggtggtggacacaatgcaccgtgggaagctgggcaactggttagctgtccgc
atggggaacgacctgcacgagatggataaaggcaccatccccaacctggccagggctgag
acgctggccagcatcgagcaggcacagcgggcgagtggagagaggcaggtgtcgggacca
agagctgagttctggaaacttcgtgggctcagagggaacaaaaagaatgaaaagaacgcc
cgtcggactcgagatgacctgctgcagctcaccattcagggcaaattcccggcctatgag
agagtcttactcagagaagccaatttcaaacggcccattgtcattctgggtcctcttaat
gatattgccatggagaagctggccagagagatgcctgatgaatatgaggtggcagaaatg
gtccctcgcagtggaggaggagagagtgcctccacagtcattaaactggacactgtgagg
aaaatagcggagaaggacaaacaccctcttcttgacatcactcccactgcagtggagaga
ctcaactacatccagtaccacccgatggtgctgttcctggaccctcacagccgcaaggac
gtcaaggccatgaggcagaggtacagccccaactccaacaagagctccagacgcctttac
tcacaggccctcaagatgaggaaacactgcagccacctgttctcagcacgtgtggacctg
cagcccaactccaatatttggtatgagagtctgaaggataagatccgccaccaacagtcc
aaacctgtctgggtgtctgaagtcacgttggagagtggtggagagcaggacctggatact
ctggaccaaacccagtcagactacctcagtgctgctagtgacctggaggacactgacgga
gaggctttcacagacggagaggcctacactgataatgaggagcttgaggaggcttatccc
ggtcaggaggcagccagggacctgcgaggctacaggggcaccggagccgccttagcccga
tcatctgagccagcctccgggcaccacagccccagcatggactccgagcctcacgccgac
tcgtactcgctcagagaaatcccgcctctgatgcacgtacctgaacccagatccacccgc
caggacaattacagcccagctcacagcaccgctgaggaggaagacccttctcatcgcagt
tttacagactcagacttcagcgctcttgatctagtcgcacccaccactccatcagacgga
cctccagactttatagcccccgaccccaccactcggcactctgtgaacgagccctcatac
gctgaggcagcgcctgagagcccacaacatgccagcctgtctgctattgaggataaatta
cagcaggctcgctcagcagagccacaggcacagccagaggataagaaaggccctcagttc
atcgtgctagcacatcatcaccaagcagtccagttcagacgcacacagatccgaggcagc
gacagctctgaggatgaagaggatgaagaggaggatgacattgaatggggtcctgcgaca
gaactctag
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