Lates calcarifer (barramundi perch): 108879020
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Entry
108879020 CDS
T04895
Name
(RefSeq) histone deacetylase 3
KO
K11404
histone deacetylase 3 [EC:
3.5.1.98
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108879020
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108879020
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
108879020
HDAC complexes
SMART complex
108879020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
108879020
NCBI-ProteinID:
XP_018525653
UniProt:
A0AAJ7PHZ0
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Position
LG8:complement(4056896..4062820)
Genome browser
AA seq
428 aa
AA seq
DB search
MTNRTSYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCR
FHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNH
KICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEA
FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVI
KQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFKIPLLVLGGGGYTV
RNVARCWTYETSLLVDESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQ
TVFENLKMLNHAPSVQIHDVPSDMLSYERNDEPDPDERGAEENYTRPEAANEFYDGDHDN
DKESDVEI
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaggacgtcttatttttatgacccagacgtgggcaactttcattacggtgct
ggccatcctatgaagcctcaccgtttgtctctgacacacagtctggttttgcactatgga
ctctataagaaaatgatggtgttcaagccatacaaagcatctcagcatgatatgtgtagg
ttccactctgaagactacatagacttcctgcagaaggtcagccccaacaacatgcagggc
ttcacaaagagtctcaacacatttaatgtgggagacgattgtcctgtgtttccaggtctt
tttgagttctgttcaagatacacaggagcctctttacagggagccacacagctcaaccac
aagatctgtgacattgccatcaactgggcaggaggtctgcatcacgccaaaaaatttgag
gcgtctgggttttgctacgtcaatgacatcgtcattagtatactggagctactcaaatac
caccctagggttctgtacattgacatagatattcaccatggtgacggcgtccaggaagcc
ttttacctgactgaccgcgtcatgactgtgtccttccacaaatacgggaactactttttt
ccaggaacaggtgacatgtacgaggtgggtgcagagagcggccggtactactgcctcaat
gttcctctcagagacggcattgatgaccagagctacaggcagctgttccagccagttatt
aaacaggtggtggatttctaccagcccacctgcatcgttctacagtgtggagcagattct
ctgggctgtgacagactgggctgcttcaacctcagtatacgagggcatggtgagtgtgtg
gagtttgtaaagagctttaagattcctctgttggtcctgggaggaggaggatacacagtg
aggaacgtggctcgctgctggacctatgagacatctctgttagtggatgaatccatcagc
gatgagctgccttacagcgagtattttgagtactttgctccagacttcacgctgcatcct
gacgtcagcaccaggatagaaaaccagaactccagacagtacttggagcagatccgtcag
acagtgtttgagaacttgaagatgttgaaccatgcgcccagtgtccagatccacgacgtc
ccctctgacatgctgagctatgaacgcaacgacgagcccgatcctgacgagaggggggct
gaggaaaactacaccagaccagaggcagccaatgagttctatgacggtgaccatgacaac
gacaaagagagtgatgtagaaatttaa
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