Lates calcarifer (barramundi perch): 108879053
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Entry
108879053 CDS
T04895
Name
(RefSeq) ras-related protein Rab-11B
KO
K07905
Ras-related protein Rab-11B
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108879053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108879053
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108879053
04031 GTP-binding proteins [BR:
lcf04031
]
108879053
Membrane trafficking [BR:
lcf04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
108879053
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108879053
Exosomal proteins of other body fluids (saliva and urine)
108879053
Exosomal proteins of colorectal cancer cells
108879053
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rab Family
Rab11/25 [OT]
108879053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_22
PduV-EutP
AAA_16
ABC_tran
AAA_14
Csa3_N
Gtr1_RagA
NTPase_1
TniB
AAA_24
DUF3289
FeoB_N
FAD-SLDH
AAA_21
SRPRB
AAA_5
Motif
Other DBs
NCBI-GeneID:
108879053
NCBI-ProteinID:
XP_018525704
UniProt:
A0A4W6D684
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All DBs
Position
LG17:7973667..7978016
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AA seq
218 aa
AA seq
DB search
MGNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM
LVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
IADRSAHDESPGNNVVDISVPPTTDGQKGNKLQCCQSL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggggaacagagacgatgaatatgacttcttgttcaaagtcgtactaattggagactct
ggagtggggaagagtaacctgctgtcccgcttcacaagaaatgagttcaatctggagagc
aagagcaccatcggggtggagtttgccacccgcagcatccaggtggacggcaagacgata
aaggctcaaatctgggacacagctggacaggaacgctacagagcaatcacctcagcttat
taccggggtgcagtcggggccctcctggtttacgacatcgccaagcacctgacgtatgag
aatgtcgaacgctggctgaaggagctgagggaccacgctgacaacaacatcgtcatcatg
ctggttggaaacaagagcgacctccgccacctcagggcggtgcccactgatgaggctcga
gcctttgcagaaaagaacactctgtcatttattgaaacatcagcgttggactccacaaat
gtagaagaggcctttaagaacattttaacagaaatctaccgcattgtctcacagaagcag
atagcggacagatctgcacatgatgagtctccaggcaacaacgtagtggacataagcgtc
ccaccgaccactgacgggcagaagggcaacaaactccagtgctgccagagcctgtga
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