Lates calcarifer (barramundi perch): 108879064
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Entry
108879064 CDS
T04895
Name
(RefSeq) 5'-AMP-activated protein kinase catalytic subunit alpha-2 isoform X1
KO
K07198
5'-AMP-activated protein kinase, catalytic alpha subunit [EC:
2.7.11.31
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04068
FoxO signaling pathway
lcf04140
Autophagy - animal
lcf04150
mTOR signaling pathway
lcf04371
Apelin signaling pathway
lcf04530
Tight junction
lcf04910
Insulin signaling pathway
lcf04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
108879064
04068 FoxO signaling pathway
108879064
04150 mTOR signaling pathway
108879064
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108879064
09144 Cellular community - eukaryotes
04530 Tight junction
108879064
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
108879064
04920 Adipocytokine signaling pathway
108879064
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108879064
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108879064
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108879064
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.31 [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase
108879064
Protein kinases [BR:
lcf01001
]
Serine/threonine kinases: CAMK group
CAMKL family
108879064
Membrane trafficking [BR:
lcf04131
]
Autophagy
Other autophagy associated proteins
Others
108879064
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
108879064
Mitophagy factors
Other mitophagy factors
108879064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
AMPK_alpha_AID
AdenylateSensor
ABC1
Kinase-like
RIO1
Kdo
APH
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
108879064
NCBI-ProteinID:
XP_018525721
UniProt:
A0A4W6CUD2
LinkDB
All DBs
Position
LG17:6978180..6989724
Genome browser
AA seq
557 aa
AA seq
DB search
MAERQQQKHEGRVKIGHYILGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVV
GKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKNGRVEDTEARR
LFQQIISAVDYCHRHMVVHRDLKPENVLLDASKNAKIADFGLSNMMSDGEFLRTSCGSPN
YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLT
RSVASLLMLMLQVDPLKRATIKDIREHEWFKQDLPGYLFPEDPSYDATVLDEEAVREVCE
KFECTESEVVSSLYSGDPQDQLAVAYHLIIDNRRIMTQASEFYLASSPPQGSFIEEGMPL
PPGVKPHPERMPPLLADSPKARCPLDALNTTRPKPLAVKKSKWHLGIRSQSRPYDIMAEV
YRAMKQLNFDWKVVNPYHLRVRRKNPVTGNLVKMSLQLYQVDNRSYLLDFKSIDDDIIEA
VGFKSGSSTPQRSGSTAGLHRPRLSIDSASPAIDLPQLSSSLPGSLSGSSPQLTPRQGSH
TMDFFEMCASLITTLAR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcggcaacaacagaaacacgaaggcagggtaaagatcggccattacatcctc
ggcgacacactcggagtgggaacattcgggaaagtgaagatcggagagcatcagttgacg
ggccataaagtggccgtaaagatcctaaacagacagaagattcgcagtctcgatgtcgtg
gggaagatcaaacgagagatccagaatctcaaactgttcagacacccacacatcatcaag
ctgtaccaggtgataagtacacccacagatttcttcatggttatggagtatgtgtctgga
ggtgaactgtttgactacatctgcaaaaatggacgggtggaggacacagaagctcgtcgt
cttttccagcagattatctcagctgtagactactgccacaggcacatggtggtccacaga
gacctcaaacctgagaatgtcctgctggacgccagcaagaacgccaagattgccgacttt
ggtctgtcaaacatgatgtcagatggggagttcttacggacaagctgtggctcacccaac
tatgctgctccagaggtcatctcaggaaggctctatgcaggcccagaggtggacatctgg
agctgtggggtgatcctgtacgctctgctatgcgggactctgccctttgatgatgagcac
gtccccacgctgtttaagaagatcagaggaggcgtcttctacatcccagagtacctgacc
cgctctgtggcctcactgctgatgctcatgctacaggttgaccctctgaagagagccacc
atcaaagacatcagggaacatgagtggtttaagcaggacctgccaggctacctgttccct
gaagacccttcatatgatgccacagtcctggatgaggaggctgtcagagaagtgtgcgag
aagtttgaatgcactgagtctgaggttgtgtccagcctttacagtggagatccacaggat
cagctagcagtggcttatcatcttatcatagacaaccgacgcatcatgactcaggccagt
gagttttacttggcctccagtcctccccagggctccttcatagaagaaggcatgccactg
ccccctggagtcaaaccccacccagagaggatgcctccgctcctggctgacagccccaag
gctcgctgtcctctggatgctctcaacaccacccggcccaaacctctggcagtgaagaag
tccaagtggcaccttggtatcaggagtcagagtagaccctatgatatcatggctgaagtg
tacagagctatgaaacaactcaactttgactggaaggtggtgaacccataccatctacga
gtgcggaggaagaatccagtgacgggcaacctggtgaaaatgagcctgcagctctaccag
gtggacaacagatcctacctcctcgacttcaagagcattgatgatgacatcattgaggcg
gtgggcttcaaatcgggttcgtccactcctcagaggtcgggctccactgccggtctccac
agaccccgactgagcatcgactctgcaagccctgccattgatttgccccagctcagctcc
tctctccctgggtccctgtccggtagctcccctcaactcactccacgtcagggatcacac
accatggacttctttgaaatgtgtgccagtctcatcaccacactcgcacgctga
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