Lates calcarifer (barramundi perch): 108879086
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Entry
108879086 CDS
T04895
Name
(RefSeq) vesicle-associated membrane protein 4 isoform X1
KO
K08513
vesicle-associated membrane protein 4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108879086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108879086
Membrane trafficking [BR:
lcf04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
108879086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
DUF5345
ATG16
MCU
RIFIN
DUF4407
Ferlin_C
Fzo_mitofusin
DUF2721
Motif
Other DBs
NCBI-GeneID:
108879086
NCBI-ProteinID:
XP_018525760
UniProt:
A0A4W6CXA8
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Position
LG17:7317987..7327258
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AA seq
153 aa
AA seq
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MREPDQEEQPEANMPPKFKRHLNDDEVTGSIRSERRNLLEEDSDEEEDFFLRGPTGPRFG
PQNDKIKQVQSQVDEVIDVMQENISKVIERGERLDDLQDKSESLSDNASAFSSRAKQLHR
RMWWRDMKMKMIIALVVVALLLIIIIPVILRYR
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgagggagccagatcaggaggagcagcctgaagccaacatgccccccaagtttaaacga
cacctcaatgacgacgaggtcacgggatccattcgcagtgagaggaggaaccttctggaa
gaggactctgatgaggaggaagacttcttcctgagagggcccacaggacccagatttgga
cctcagaatgacaaaatcaaacaggtgcagtcgcaagttgatgaggtgatcgatgtgatg
caggagaacatctccaaagtgatagagaggggcgaacgtctcgacgacctgcaggacaag
tcagagagcctatcggacaacgcgtctgccttcagtagccgagccaaacagctgcatagg
aggatgtggtggagagacatgaagatgaagatgattatcgccttggttgtggtcgctctc
ctgctcattatcatcataccagtgatcctgcgatatcgctag
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