Lates calcarifer (barramundi perch): 108879102
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Entry
108879102 CDS
T04895
Name
(RefSeq) cyclic nucleotide-gated cation channel
KO
K04949
cyclic nucleotide gated channel alpha 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108879102
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108879102
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
Baculo_PEP_C
CsoSCA_C
SlyX
ADIP
Golgin_A5
Motif
Other DBs
NCBI-GeneID:
108879102
NCBI-ProteinID:
XP_018525784
UniProt:
A0AAJ7PI13
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Position
LG8:3328763..3335099
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AA seq
679 aa
AA seq
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MTGPVQDSHRLSVKTWTEEESDRADSTLSRGQSMCDDTSSELQRMAAIDRRDINSQNSFR
GRGALSRIVSMVMTLREWAQKSLAEETERPDSFLERFRGPAHMDIQAPPSRFSHSHTGSD
ADNEIRRTRRTRRKWNIVVLSPSDDAYYHWLMVIGAAVFYNWTLLVVRACFDELQMRNVL
VWLVLDYVCDGVYILDIAVRLHTGFLDQGLMVKDVRRLRETYIRTLQSKLDICSILPTDL
LYLTVGISYTPLLRFNRLLRLPRLFEFFERTETRTGCPNAFRICKLVLYILVIIHWNACG
YYSFSKVLGLGSDSWVYPNASDPEFGSLTRSYIYCLYWSTLTLTTIGETPPPVRDEEYLF
LIFDFLVGVLIFASIVGNVGSMISNMNATRAAFQSRVDALKHYMHFRHVSKVLEQRVIRW
FDYLWSNKKTIDEQEVLRSLPNKLRAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRP
QVFSPGDYICRKGDVGKEMYIIKDGRLAVVGEDGVTQLAVLTAGSCFGEISILNISGSKM
GNRRTANIRSLGYSDLFCLSKQDLMEALQEFPHARAQLEQRGRDILQKEGLLEEVNVSAG
EELEEKVERLESSLDRLQTCLARLQSEFNSSQLRLKQRITALEHNITTVATGSGFLSDAD
GNESVSGGDGVRSEINIRL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtccagtgcaggattcacacaggctgtctgtgaaaacatggacagaggaggag
agcgaccgagctgacagcacactcagcagaggacagtcgatgtgtgatgacacttcttca
gagctacagagaatggcggccattgacaggagggatattaattcccagaattcttttcgt
gggcgaggtgctctctctaggatagttagtatggtgatgactctaagagaatgggctcag
aagagtttagctgaagagacagagcgaccagattccttcttggaacgtttcagaggcccg
gcccacatggacatacaggccccacccagcaggtttagccacagccacactggctctgat
gcagataatgaaatcagacgaaccagacgcacgagaaggaagtggaatatagtggtctta
tccccatccgatgatgcatactaccactggctgatggtgattggtgctgcagttttttat
aactggaccttacttgttgtcagggcctgttttgatgagctccagatgaggaatgtgtta
gtgtggctggtgctggactatgtctgtgatggagtctatatcctggatattgctgtccgc
ctccatacaggtttcttggatcagggcttgatggtgaaagatgttcgacgcctgagagaa
acctatattcgaacgttacagtctaaacttgacatctgctccatccttccaactgacctc
ctgtacttgactgttggaatcagctacactcctcttcttcgattcaaccgtctcctgcgt
ctgccacgtctgtttgagttctttgaacgtacagaaacccgaacgggctgccccaatgct
ttccgtatctgtaagctggttctgtacatcctggtgattatccactggaacgcctgtgga
tactacagcttctccaaggtcctaggcctgggttctgattcttgggtttatcccaatgcc
tctgaccctgagtttggctccctgaccaggagttacatatattgtctgtactggtcaacc
ctgacactaaccactattggagagacaccacctcctgttagagatgaggaatatctgttc
ttaatatttgactttctggttggtgtcctgatatttgcctccattgtgggaaatgttgga
tccatgatctccaatatgaacgccacaagggcagcctttcaaagccgtgtagatgcactg
aaacactacatgcacttcagacatgtcagcaaggtgctggagcagcgtgtaattcgctgg
tttgactacctctggtccaataagaagacaatagatgaacaggaagtgctgaggagcctg
cccaataaactgagagcagagattgctattaatgttcacctggacacactgaaaaaggtg
cgtattttccaggactgtgaggcaggcctcctggtagagttggtgttaaaacttcgacca
caggttttcagtcctggagactacatctgtagaaagggagacgtgggtaaggagatgtac
ataattaaagatggccgcctagcagtggtgggggaggacggtgtcacccagttagctgtt
ctaactgcagggagctgcttcggtgaaatcagcatcctgaacatcagcggcagcaagatg
gggaacagacgcacagctaatattcggagtctgggatactcagacctgttctgtctctcc
aaacaagacctcatggaggcactacaagagttccctcatgccagggctcagctggagcag
agggggcgggacatcctgcagaaggaggggcttctggaggaagtgaatgtgtctgcagga
gaagagctggaggagaaagttgagaggctggaaagcagtctggaccggctacagacatgt
ttggcccgtctgcagagcgagttcaactcctcccagctgcgactgaagcagcgaatcacc
gccctcgaacacaacatcaccacagtggccacaggcagcggcttcctgtcagatgctgac
ggtaatgagagtgtctctggtggtgatggggtgcgcagtgaaatcaacattcggctctga
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