Lates calcarifer (barramundi perch): 108879132
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Entry
108879132 CDS
T04895
Name
(RefSeq) vascular endothelial growth factor receptor 2 isoform X1
KO
K05098
kinase insert domain protein receptor [EC:
2.7.10.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04020
Calcium signaling pathway
lcf04370
VEGF signaling pathway
lcf04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108879132
04370 VEGF signaling pathway
108879132
04020 Calcium signaling pathway
108879132
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108879132
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108879132
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108879132
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
108879132
Protein kinases [BR:
lcf01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
108879132
CD molecules [BR:
lcf04090
]
Proteins
108879132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_2
ig
VEGFR-1-like_Ig-like
VEGFR-2_TMD
V-set
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
Receptor_2B4
C1-set
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
108879132
NCBI-ProteinID:
XP_018525829
UniProt:
A0A4W6CK86
LinkDB
All DBs
Position
LG17:complement(6420224..6436752)
Genome browser
AA seq
1351 aa
AA seq
DB search
MMALAVSVIPVLGIILKISCAAAIELRFMPDPPTLNIYGIHRMNKSDNLELTCRGRQYLR
WSTPPISTRFSVSDCSGSGLFCTTLRISNATVNETGQYQCSYRDLKVEDGKTAAAAYVFV
HDYKVPFVPSEKEYEVVFIREGERVVIPCRGSVENLNVTLHTKYPNKELHPDGKDSHWDA
KTGFTVPSYLISYAGVVSCQTRVGNETFKSPLYIVAVVGYKIYDLTLTPAQVRLSVGERL
VLSCTAHTELNVGIEFNWTHSGQALTSVNGSRPTHETPHKKKLWNSLELSNTLTVENVTV
DHSGEYTCTASSGQMEKSASAVLKVYEKPFIDMKEPWMKVWEVNVGDLTTLIPVKYSAYP
EPSFKWLKNGLPMKDDYRIKQRNDALIIRAVTEMDAGNYTIVLTNKNTKEEHRRSFQLLV
NVPPHIIEKEVAVDTDVYPYGSSPTLRCTARGFPTPVHIHWQWMSKEDCPEVFMSGLIKS
EIQLKECTGWRDISNSSGHNHVERIMTDTDHAQKKIVSSLKIQKAEAHALYRCMAANKIG
KDSRIIFFHVTRGLEVSVSPSNQPLEELMDVVLRCKADRVIYGNLAWFRVTNISKSEQVA
PVQPCRSLSLQPRPLSQVVLSSPQATNITLELPLLNASRQDEGLYACQVENIKTRERTCL
LRRLSLRGLEAARILNNLTDQKVNVSATITLHCDAAGTPNPTVVWTKNNHTVVEGSGVIL
SQHNHVLTIQRVKKEDSGLYNCTACNSLGCDTSLAFLMTEGAEEKTNVELIVPIGSVVIA
MFFWLLIVFVIRGRKRPNGGDLKTGYLSMILDSEDMPMDEQCERLTYDANKWEFPRDRLK
LGEPLGRGAFGQVVEAAAFGIEKATTCTTVAVKMLKEGATSSEYRALMSELKILIHIGHH
LNVVNLLGACTKPGGPLMVIVEYCKHGNLSSYLKSKRGEYSPYKRKRVDSQRWASAEEDV
TGGDLGLGKIAQLDICTGTAVCSAAGDKASGSNLDSREESSDDDHLTMEDLISYSFQVAK
GMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDVYKDPDYVRKGDARLPLKWMAP
ETIFDRVYTTQSDVWSFGVLLWEIFSLGASPYPGVCIDESFCRRLKEGTRMRPPEYATTE
IYQTMLDCWLDRPTDRPTFAELVEHLGNLLQASAQQDGKDYIPLTAGETEGSPVAPDPRS
PYSRPQSGEILEAQLHYDSPPSLGPSQQSERCSRPLSVKTFEDIPVAHSIVMEGHIDSGF
SPEEVKGLNQHLQTTPNFSQLLRCKSKESLASESSNQTSGYQSGYHSDDTDTPIYANEEV
IMKHNMLKKKPPLPKTPDKFNVEIRYSTPPV
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctggcagtctccgtcatcccagtacttggcattattctgaaaatcagctgt
gctgctgccattgaactgcgctttatgcccgacccaccgacacttaacatctatggcatt
cataggatgaataaatccgacaacctggaactgacatgcagaggtcgtcagtacctgagg
tggtcgactcctcccataagcactcgcttctctgtcagtgactgcagcggatcaggactc
ttctgcacaacactgaggatctccaatgcaactgtcaatgaaactggacagtatcagtgt
tcctacagagacctgaaagtcgaagatggcaagactgcagctgcggcttatgtctttgtc
cacgattacaaggtgccatttgtgccgtctgagaaagaatatgaggtggtgttcatccgt
gaaggggagcgggtggtgataccttgccgaggctcggtggagaatctcaacgttacgctc
cacactaagtatccaaataaggagcttcatcccgatgggaaggattcacactgggacgca
aagacgggcttcactgttcccagctatctgatcagctacgctggcgtcgtgtcctgccag
acccgggtcggaaatgagacgtttaagtcccctctctacattgtggctgttgtcggatac
aagatctatgacctcaccctgaccccggcgcaagtgaggctgtctgtgggggagcggctg
gtgctcagctgcactgcccacaccgagctcaacgtgggcatcgaattcaactggactcac
tctggtcaggccctgacctcagtgaatggttcgaggccgacccacgagacgccccacaag
aagaagctgtggaactctctggagctgtccaacacactcacggtggagaatgtgacagtc
gaccacagtggagaatacacctgcactgcgtccagtggacagatggagaaaagtgcctct
gcagtgcttaaagtgtatgagaagcctttcattgatatgaaagagccatggatgaaggtt
tgggaggtaaatgtgggagatctgaccaccctgatccctgtcaagtactcagcctaccca
gaacccagctttaaatggttaaaaaatggcctaccaatgaaggatgattacagaataaag
cagaggaatgatgccctcatcatccgtgcagtcacagaaatggatgcagggaattacaca
attgtcctgaccaataagaacactaaagaggaacacagacgctccttccagctgctggtc
aatgtgcccccacatatcattgagaaggaggtggctgtggacactgatgtatacccatat
ggcagcagccccaccctgaggtgcaccgctcgtggatttcccacacctgtgcacatccac
tggcagtggatgtccaaagaggactgtccagaggtctttatgtcagggctgataaagtct
gagatacagcttaaggagtgtactggttggagagatatcagcaacagctctggtcacaac
catgtggaacgaattatgacagacactgatcacgcccaaaagaaaatcgtgagctcactg
aagattcaaaaagcagaggcccatgccctctacagatgcatggctgccaacaaaatagga
aaggattcacgcatcatttttttccatgtgacacgcggccttgaggtgagtgtgtcacca
tccaatcagcccttagaggagctcatggatgtagttttgaggtgtaaggcggaccgggtg
atctacggcaacctggcctggttccgtgtgaccaacatctcaaagtcagagcaggtggcg
ccggtacaaccctgccgctccctgtcattgcagccgaggcccctatcgcaggtggtgctg
tccagcccacaggccaccaacataacactggagttgccgctgctcaacgcatcccgtcag
gatgagggcctatacgcctgtcaggtggaaaacatcaagacgagggagagaacttgtctg
ctacgccgactctctctcagaggtctggaggctgcgaggatccttaataatttaaccgac
caaaaagttaacgtaagtgcaacgattactctccattgtgatgctgctgggacgccaaac
ccaacggtggtgtggaccaaaaacaaccacactgtggtggagggctcaggtgttattctg
agccagcacaaccatgttttaaccattcagcgtgtgaagaaggaggacagtggtctgtac
aactgcactgcgtgtaacagccttggctgtgacacctcactggcctttctgatgactgaa
ggcgcagaggaaaagacgaatgtggaactgattgttccgattgggtcagtggtcatcgcc
atgtttttctggttgctgatcgtctttgtcatccgtggaagaaaaagaccaaatggtggg
gatctgaagacgggctacctgtccatgatcctggactcagaggacatgcccatggacgag
cagtgtgaaaggctcacgtatgatgctaacaagtgggagtttcctcgggacaggctgaag
ctcggtgaaccactgggacgaggagcgtttggccaggtagtagaagcagccgcgtttggc
attgagaaagcaactacatgcaccactgttgcagtcaagatgcttaaggagggagccaca
tctagtgagtaccgtgccttgatgtcagaactaaaaattctcattcatattggacatcat
ctcaatgttgtcaaccttctgggagcctgtacaaagcctggggggccactgatggtgatt
gtagagtactgtaaacatggaaacctctccagctacctgaagagcaagcgtggagagtac
agtccatacaagaggaagcgggtggatagccagaggtgggcatctgcagaggaggatgtg
actggaggggatctgggtctggggaagattgcccagctggacatctgcacgggaaccgct
gtctgctctgcagctggagacaaggcttcaggcagcaacctggactctcgggaagagagc
tcagacgatgaccatctgaccatggaggatctgataagctacagcttccaggtggccaaa
ggcatggagtttctgtcctctcgcaagtgtatccacagagatctagcagccagaaacatc
ctgctttcagagaacaatgtggtgaagatctgtgactttggccttgctagagatgtctac
aaagaccctgactatgtccgcaaaggagatgcacgtctccctctaaagtggatggctcct
gagaccatatttgaccgggtgtacaccacacaaagtgatgtttggtcctttggggtcctt
ctctgggagatcttttctttgggggcctctccctatccgggtgtttgcatcgatgaatct
ttctgcagaaggcttaaggaaggcaccaggatgagacccccagaatacgccaccactgag
atataccagaccatgttggactgctggttggatcgtcctacagaccggccgacgtttgca
gagctggttgaacatctgggcaatctgctacaggccagtgctcagcaggacgggaaggac
tacatccccctgacagcaggtgagacagagggatcaccagtggcccctgaccccaggagc
ccctacagcagacctcaaagtggggaaatcctagaggctcagctccactacgacagcccg
ccgtctcttggaccgtcccaacagagtgaaaggtgcagtcggcccctcagtgtgaagacg
tttgaggacatccctgtggcacacagcattgtcatggagggtcacatagacagtggcttc
tcaccagaggaggtcaagggtctgaatcaacacctgcaaaccacgcccaacttcagccaa
ctgctacgctgtaagagtaaagagtctctggcctcagaatcgtccaatcagacgagtgga
taccagtcagggtaccactctgatgacacagacaccccaatctatgctaacgaggaggtg
ataatgaagcacaacatgctgaagaagaagcctccactgcccaagacgcctgacaagttc
aacgtggagatccgttacagcacgccacctgtctga
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