Lates calcarifer (barramundi perch): 108879194
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Entry
108879194 CDS
T04895
Symbol
snrpd3l
Name
(RefSeq) small nuclear ribonucleoprotein D3 polypeptide, like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108879194 (snrpd3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108879194 (snrpd3l)
03041 Spliceosome [BR:
lcf03041
]
108879194 (snrpd3l)
03032 DNA replication proteins [BR:
lcf03032
]
108879194 (snrpd3l)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
108879194 (snrpd3l)
Spliceosome [BR:
lcf03041
]
Complex A
U1 snRNP components
Sm proteins
108879194 (snrpd3l)
U2 snRNP components
108879194 (snrpd3l)
Complex B
U1 snRNP components
108879194 (snrpd3l)
U4/U6.U5 tri-snRNP components
108879194 (snrpd3l)
Complex C
U2 snRNP components
108879194 (snrpd3l)
DNA replication proteins [BR:
lcf03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
108879194 (snrpd3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Kringle
Motif
Other DBs
NCBI-GeneID:
108879194
NCBI-ProteinID:
XP_018525905
UniProt:
A0A4W6CIH7
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All DBs
Position
LG9:8448979..8451609
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AA seq
127 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGRGKAAILKAQVAARGRGRGGMGRG
NIFQKRR
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcggagtaccaatcaaggttctgcatgaagcagaggggcacattgtgacctgt
gagaccaacacgggagaggtgtacaggggcaagctgatcgaggctgaggacaacatgaac
tgccagatgtctaatatcacagtgacctatcgtgatggccgggttgcacagctggagcaa
gtctacatccgtggcagcaagatccgcttcctgatcttaccagacatgttaaagaatgcc
cccatgttaaagagtatgaaaaacaagaaccagggatctggtgcgggaagaggcaaggca
gctattctcaaagcacaagtggcagcaagaggcagaggccgtggtggaatgggaagaggt
aacatcttccagaagaggcgataa
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