Lates calcarifer (barramundi perch): 108879227
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Entry
108879227 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: sarcoplasmic/endoplasmic reticulum calcium ATPase 2b
KO
K05853
P-type Ca2+ transporter type 2A [EC:
7.2.2.10
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04148
Efferocytosis
lcf04260
Cardiac muscle contraction
lcf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108879227
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108879227
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108879227
04261 Adrenergic signaling in cardiomyocytes
108879227
Enzymes [BR:
lcf01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
108879227
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
E1-E2_ATPase
Cation_ATPase_C
Cation_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
HAD
Motif
Other DBs
NCBI-GeneID:
108879227
NCBI-ProteinID:
XP_018525941
UniProt:
A0AAJ7LLR7
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Position
LG9:8333324..8356533
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AA seq
1042 aa
AA seq
DB search
MDNAHTKTVEEVYSFFNVNESTGLSLEQVKKQRERYGPNELPAEEGKSLWELVIEQFEDL
LVRILLLAACISFVLAWFEEGEETVTAFVEPFVILLILIANAIVGVWQERNAENAIEALK
EYEPEMGKVYRQDRKSVQRIKARDIVPGDIVEVAVGDKVPADIRLSSIKSTTLRVDQSIL
TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAVGVVVATGGNTEIGKIRDEMA
STEQERTPLQQKLDEFGQQLSKVISLICIAVWIINIGHFNDPVHGGSWIRGAVYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ
MSVCRMFIIDQAGGEHCSLKEFTVTGSTYAPDGEVFHDGKPVKCSQYDALVELASICALC
NDSSLDYNETKGVYEKVGEATETALSCLVEKMNVFDTDVKGLSKIERANACNSVIKQLMK
KEFTLEFSRDRKSMSVYCTPNKARTSVGKMFVKGAPEGVIDRCTHVRVGSNKVPLTPGIK
EKLMSVIREYGTGRDTLRCLALATRDNPMSKDKLVLEDSSRFIEYETDLTFVGCVGMLDP
PRAEVAASIRLCRLAGIRVIMITGDNKGTAVAICRRIGIFGEDDDVSSMAFTGREFDDLS
PAAQREAVVKARCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGS
GTAVAKTASEMVLADDNFATIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG
FPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNAREPLISGWLFFRYLAIGC
YVGAATVGAAAWWFVAAEDGPRITFYQLSHFLQCGPENPDFQDMDCKVFESPYPMTMALS
VLVTIEMCNALNSVSENQSLLRMPPWENVWLLGAICLSMSLHFLILYVEPLPIIFQITPL
NLTQWLMVLKISLPVILLDEFLKFAARNYLEPGKDLEKPASSKGCSLSACMEGISWPFVA
ISLPLVLWIYSSDTNMADMFWS
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgcacacacaaagacggttgaagaagtttacagcttttttaacgtgaatgaa
agcacgggtctgagcttagagcaagtgaagaaacaacgggaacgatatggaccaaacgaa
ctgccagctgaggagggtaaatccctttgggaactggtgattgaacaatttgaagacttg
cttgtgaggatccttttactcgctgcttgcatatcctttgtgctggcctggtttgaagag
ggagaagaaaccgttacagcctttgtggagccttttgttattctacttattctcatagca
aatgccattgtaggagtctggcaggagcgaaatgctgaaaatgccattgaagcacttaag
gagtatgagccagagatggggaaggtataccgccaggacaggaagagcgtccagcggatc
aaggcccgggacattgtgcctggggacatcgtggaggtggcagttggtgataaagtgcct
gcagacatcaggctgtcttctatcaagtcaaccacactaagagtagaccaatcaattctc
acaggagagtctgtgtctgtgatcaaacacactgacccagtgcctgacccgcgtgctgtc
aaccaagacaagaagaacatgctcttctctggcaccaatattgcagctggtaaggctgtt
ggtgtggtggtggccacaggtggcaacacagagattggcaaaatccgagatgagatggca
tccacagaacaggagcgcacgcccctgcagcaaaagctggatgaatttggacagcaacta
tccaaggttatttcactgatctgcattgctgtgtggatcatcaatattggacatttcaat
gatcctgtccacggaggctcctggatccgaggcgctgtctactacttcaagattgctgtg
gctctggcagttgctgctattcctgaaggtctgcctgctgtcatcactacttgcctggca
ttaggaacacggcgcatggccaaaaagaatgccattgtccgtagtttgccctctgtggag
acccttggctgtacatctgtcatctgctctgacaagacaggcacgcttaccaccaaccag
atgtctgtgtgtaggatgtttatcattgaccaagcagggggtgagcactgttccttgaag
gaattcactgtcacaggatctacgtatgccccagatggagaagtgttccatgatggcaaa
ccagtcaaatgttcccagtatgatgccttggtggagctggcctctatctgtgctctctgt
aatgattcctcattggactataatgagaccaaaggtgtgtatgagaaggtgggtgaggcc
acagagacagctctctcatgcctggtggagaagatgaacgtgtttgatacagatgttaaa
ggcctgtccaagattgagcgagccaatgcctgcaattctgtgatcaagcaactgatgaag
aaagagtttaccttggaattttccagagaccggaagtccatgtctgtgtactgcactcct
aataaagcccgcacctctgtcggcaagatgtttgtaaagggtgctcctgagggagtgatt
gacaggtgcacacacgtccgtgtaggcagcaacaaggtgccgttgacccctggcatcaag
gaaaaactcatgtctgtcatcagggagtatggaactggcagggacaccttgcgctgtctg
gctctggccacccgagacaaccccatgagcaaagacaaacttgtattagaggactccagc
cgctttattgagtatgagactgacctgacatttgttggctgcgttggcatgctggatcct
cccagggcagaggtggcagcctctatcagactctgccgccttgcaggcatcagagtaatt
atgatcactggagacaacaagggaacagcggtggctatctgcagacgtattggtattttt
ggtgaggatgatgatgtctccagcatggctttcactggtcgagagtttgatgatctgtca
cctgctgcacaaagagaagctgtggtcaaggcccgttgctttgctcgggttgagccttca
cataaatccaagattgtggagtacctgcagtcctatgatgagattacagctatgactggt
gatggagtaaatgatgctcctgctctgaagaaggctgagattggcattgccatgggctca
ggcacagctgtggccaagaccgcctctgagatggtgttggctgatgacaactttgccacc
attgtagctgcagtcgaggaaggcagagccatttataacaacatgaaacagttcatcaga
tacctcatctcctcaaatgtgggcgaagttgtctgtatcttcctgactgcagctctgggg
ttccctgaagctctcatccctgttcagctgctttgggtcaacctggtgactgatggtttg
cctgcaactgccctgggcttcaacccaccagacttggacatcatgaacaaacccccacgc
aacgctcgtgagccacttatctctggatggctcttcttcagatacttagccattggatgt
tatgtgggtgctgccactgttggtgctgctgcctggtggtttgttgctgctgaggatgga
ccaaggattaccttttaccagctgagccacttcctgcagtgtggtccagagaatccagac
ttccaggatatggactgtaaggtgtttgagtccccttaccctatgaccatggccctgtct
gtgctggtcaccattgagatgtgcaatgctctgaacagtgtgtcagagaaccagtccctc
ctgcgtatgcctccctgggagaacgtgtggctgctgggagccatctgcctctccatgtct
cttcacttccttatcctctacgtggagcctcttcctatcatcttccagatcacccctctg
aatctgacacagtggctcatggtgctcaagatctcactgcctgtcattctactggatgag
tttctcaagtttgctgccaggaactacctggagcccggtaaagacctggagaagcctgcc
agctccaagggctgctccctgtctgcatgtatggagggcatctcctggcccttcgtggct
atttccctccccttggttctctggatctacagctccgacactaacatggccgacatgttc
tggtcctga
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