Lates calcarifer (barramundi perch): 108879236
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Entry
108879236 CDS
T04895
Symbol
rnf170
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108879236 (rnf170)
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108879236 (rnf170)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108879236 (rnf170)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_2
TRAF3_RING
zf-Nse
Baculo_IE-1
zf-RING_10
DpnI_C
Motif
Other DBs
NCBI-GeneID:
108879236
NCBI-ProteinID:
XP_018525954
UniProt:
A0A4W6DDJ3
LinkDB
All DBs
Position
LG9:complement(8021266..8026065)
Genome browser
AA seq
268 aa
AA seq
DB search
MEDNQCGDVDYLIQDEDTLIEGVSNQVLFVVVLSVTFLAGLLTLLCRQEQQNIHPENQEH
VRAVRQQLQTEQDENPQAEARQQYYTDMSCPVCLQQAVLPVETNCGHLFCGSCIIAYWRY
GTWLGAINCPICRQMVTLLFPLFHEHATPQRVQDGEAEPQLILRDINDYNRRFSGQPRSY
MDRLRDVPTLLRHAFREMFSVGGLFWMFRIRILLCLVGAITYLASPLDILPEALFGLLGF
MDDFFVILLLFVYISIMYREVVTQRLNG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaatcaatgtggggatgtggactacctgatccaagatgaggacaccctcatt
gaaggcgtcagcaaccaggtcttatttgttgtggtgctcagtgtcaccttcctcgcaggc
ctcctcactctgctctgcagacaagagcagcagaacattcatcctgagaatcaggagcac
gttcgagccgtccgacaacaactgcaaacagagcaggatgaaaatcctcaggcagaggcc
cggcagcagtattacaccgacatgtcttgtcctgtgtgtttacagcaagctgttcttcct
gtggaaacaaactgtggacaccttttctgtggctcctgcattatagcatactggaggtat
ggcacctggctgggtgctattaactgtcccatctgcagacaaatggtgacattgctattc
ccgctatttcatgagcacgccactcctcagagggtccaggatggcgaggcagagcctcag
cttatattacgagacatcaacgattacaaccgcaggttctcaggccagccaagatcttat
atggacaggctgcgagatgtgcccaccctgcttcgtcatgcctttagggagatgttttct
gtgggtggcctcttctggatgttcaggattcgaattcttctctgcctagtcggcgcaatc
acctacctggcgtcgccactcgacatcctccctgaggcactttttggtctcctgggattc
atggatgatttctttgtaatcctgcttctctttgtttacatctctatcatgtacagggag
gtggtcacgcagagactgaacggttag
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integrated database retrieval system
