Lates calcarifer (barramundi perch): 108879246
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Entry
108879246 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 26-like
KO
K10505
zinc finger and BTB domain-containing protein 26
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108879246
04121 Ubiquitin system [BR:
lcf04121
]
108879246
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
108879246
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108879246
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Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
BTB
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-Di19
zf-C2H2_AcuF
Zn_ribbon_SprT
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
108879246
NCBI-ProteinID:
XP_050928837
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Position
LG9:complement(9180891..9189801)
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AA seq
461 aa
AA seq
DB search
MSGSSDTLRFCLPTHGDSILSKMNALREDLRFCDVTLLLRGPQGASVRPLRFHGHRVVLA
ASSDFLRDQFLLHEGRAELCVGVVSSMEVGKRLLLSCYTGLLEVPLRELVSYLTAASALQ
MSQVVEKCAQAISQYLRPTLAFLKLERQSEEKEILQPDSGWPGPSSKNWEERDAAQPSTG
IQEASTKEGGAVVIQSELNSGQGANVDSQGLREVGEDGKAVKAEEASYCFSTPESEEGGG
IQAVHTNKPCYQVHHISGTLTCTLHSPTAAQDHISSTTIRSSSEHEDPDEILSVGAQLQE
SGELMDSNLFCLSSAHLSKNHCSGDELTEVSDSVLVQRPYLCRRCDRVFQHLESYAGHLK
EHRQYLCLVCGKGFSHKSNLSRHIRLHTGVKPFRCPLCHKTFSQKAPLQDHLNLHTGDKP
HKCSYCAVHFAHKPGLRRHLKDVHGKVVFMHPCPQFGKMSR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctcctctgacaccttaaggttttgtctccccacccatggtgactccatcctg
agtaaaatgaatgctctgagagaggatcttcgcttctgtgatgtcacacttctcctcagg
ggtccgcaaggcgcctctgttcggcccctccgtttccacggccatagagtggtgcttgca
gcgtcctcagacttcctccgtgaccaattcctgctccatgaaggccgggcagagctgtgc
gtgggtgtagtttccagcatggaggttggtaagagactgctcctgtcctgctacaccggg
ctcctggaggtccccctcagggagctggtgagctacctcactgcagccagcgcgcttcag
atgagccaggtcgtggaaaaatgtgcccaggccatctctcagtacctccgtccaaccctg
gcattcttgaaactagagagacaatcagaggagaaggaaatcctgcaaccagacagtggc
tggccaggccccagctccaaaaattgggaggaaagggatgcagcccaacccagcaccggt
atccaggaagcaagtactaaggaagggggagcggttgtgattcagtccgagttgaattcc
ggccaaggagccaatgtggatagtcaaggattgagagaggtaggagaggatgggaaggcg
gttaaagctgaagaagcatcatattgtttcagcaccccagagtcagaggaaggtggaggc
atccaggctgttcacacaaacaagccgtgctatcaagttcaccacatttcaggtacccta
acatgtacgctacactctcctacagctgcccaagaccatatatcctccacaaccataagg
agttccagcgaacacgaggacccagatgaaatactctctgtgggagctcaactgcaagag
agtggagagctgatggactccaatttattttgcctctccagtgcacatctatcaaagaac
cactgttctggagatgagctgacagaagtttctgacagtgtattggtccaaaggccgtac
ctgtgcaggaggtgtgacagagtcttccagcacctggagagctacgcaggacacttgaag
gagcacagacagtacctgtgtttggtctgtgggaaaggcttctcccacaagagcaacctg
tctcgccacatacgcctccacaccggcgtcaagcccttcagatgcccactgtgccacaag
acattttctcagaaagcccccctgcaagaccacctcaacctgcacacgggggacaagccc
cataagtgcagctactgtgctgtgcactttgcacacaagccagggctcaggcgccacctg
aaggacgttcatggaaaggtggttttcatgcacccatgcccgcagtttggcaagatgtca
agatga
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