Lates calcarifer (barramundi perch): 108879267 Help Entry 108879267         CDS       T04895                                  Name (RefSeq) roquin-2 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism lcf  Lates calcarifer (barramundi perch) Brite KEGG Orthology (KO) [BR:lcf00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:lcf03000]     108879267    04121 Ubiquitin system [BR:lcf04121]     108879267 Transcription factors [BR:lcf03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     108879267 Ubiquitin system [BR:lcf04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     108879267 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf_CCCH_4 Prok-RING_4 zf-C3HC4_2 zf-RING_4 zf-C3HC4 zf-C3HC4_4 Motif Other DBs NCBI-GeneID:  108879267 NCBI-ProteinID:  XP_018526003 UniProt:  A0A4W6C7D2 LinkDB All DBs Position LG9:complement(9153149..9179034) Genome browser AA seq 1154 aa AA seqDB search MPVQAAQWTEFLSCPICYNEFDSSGHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTD IDLLPVNCALLQLVGAQVPNLQQVSLSSAAEVAHYEVCRVCVEELALYLKPISGTKGVAT LSPSVLSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW SSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLTSLRPHLELLANI DHNPDAPAPSWEELESVMLAVKLVVHGLVEFIQNFSKKSHDTPQPQANSKYKTSMCRDLR QQGGCPRGTNCTFAHTQDELEKFRLRNKKSSSVGRAFPLAPGVMGKTFTMEGSIHADVSA GVGQGLKGTMENTAPLTEGVPGLTHPQLISRGADMIEEMKRVVPNGSGGANGSSVLSGAN RIASGSTEQKPISPPRTPVSHSTASSPLTTVGRGDGSAPVPKHGQFMLRAPHPSQATELY YQEPHSAYDTAHYQPTSGSYYPSTLHAPHKPCMARFLRSSNVPESSLPPSIGPPPTSYPS DPQTPHPPSSSSSGYPPHPPRDRMGPAFHAHPGQPQYGPLAPAHGVYAPLYDSRRVWRPQ LYHREDARSNSLPPEVLHSSVYQPPLRERFNSLDSNYCSGAEHRAGLHRDYGRVPLGYED LFRRKQEQWAHHHHHHNTNRPSQSSPIFTIDFATEHVESSGGQCVGCRFRGEESLAHYSP WSCGTIGPCLSPFEPETLTHTSAHSCSEHSELDSNGGGGGGVGGSSVGKRWLHSLDHYRR LKDEDPIIPFSEGPIISKWGAISRASRTGYHTTDPVQATACQSSASTTPINFKDYNPHLD QSDYRWSSRGSDSSSHSSFLESEQLCASELHGRRTSISSGEKMVSDLQAHQTTYSQDRDR AESESDPDRDIELELCALDMEDSDHQEIKSQESLDLATPQSQDASHLLPPPCSSPLLSSP VEDHPQTEGPSTEKMDAHLLKKMAFRKSLSPGGLVSGGLGVGKLVLRTGPSRLGDASTRG CPETPGTEMLLNGS NT seq 3465 nt NT seq  +upstreamnt  +downstreamnt atgccagtgcaggcagcccagtggacagagttcctgtcctgtcccatctgctacaatgag tttgacagcagcggccaccagcccatcagcctgggctgctcccacacggtgtgtaagacc tgcctacacaaactgcaccgcaaagcctgccccttcgaccagacgccgatcagcacggac atcgatctgctgccggtcaactgcgccctgctgcagctggttggagctcaggtcccaaat ctgcagcaggtgagcctgagcagtgcagcagaggtggcacactatgaggtctgcagggtg tgtgtagaagagctggctctctacttaaaacctatcagcggaacaaaaggtgtggcgacc ctgagtccgagcgtgcttagtcggcccatgcagaggaagctggtgaccttggtgaactgc cagctggtggaggaggagggccgtgtgcgggctgtgcgtgcaggccggtcgctgggggaa cggactgtaaccgagctcatcctgcagcaccagaacccccagcagctctctgccaacctc tgggcggcggtgagggcgcggggatgccagttcctgggacctgctatgcaagaagatgcg ctgaagctggttttgctggctctggaggacggctcggctctgtccaggaaggtgctggtt ttgtttgtggtccagaagctcgaggctcggttccctcaggcctcgaaaaccagcataggc cacgtggtgcagctgctctacagggcttcctgcttcaaggtgactaagcgtgatgaggac tcctccctgatgcagctgaaggaagagtttcgtacatacgaggctctcaggagagaacac gatgcccagatcgtccacatcgccatggaggcgggcctgcggatctcacctgagcagtgg tcttccctgctgtacggagacctggtccacaagtcacatatgcagtccatcattgacaag ttgcagtctccagagtcgtttgcaaagagcgttcaggagctcacaattgttctgcagagg acaggagacccagccaacctcacaagccttagaccacacctagagctgctagccaacata gaccacaatccagatgccccggcgccatcgtgggaggagctagagagtgtgatgctggct gtgaagttggtggttcacggacttgtggaattcatacagaacttcagcaagaagagccac gacactccacagcctcaggccaacagcaagtataagaccagcatgtgccgcgacctgcgt cagcagggtggctgtccccgaggaaccaactgtacattcgcacacacacaggacgagctg gagaaatttagactgaggaacaagaagagcagcagcgtgggccgtgcgtttccgttagca cctggggttatgggtaaaaccttcaccatggagggcagcatccacgcagatgtgtctgct ggggtggggcaggggctaaaaggcacaatggaaaacacagctcccctgacagagggagtt cctggcctcactcacccccaacttatctccagaggggctgacatgatagaggaaatgaag cgagtggtgccaaatggatccggtggggctaacgggtccagcgtgctatctggcgccaac agaattgcgtcggggtcaacagaacagaagcccatatcccctcccaggacaccagtcagt cactccacagcatcgtctcccttgaccacagttggacggggtgatggcagtgctcccgta cccaaacatggtcagttcatgctgcgagcaccacatccttcgcaggcgacagagctgtac tatcaggagccccactccgcttatgacacagcccactatcagccaacctcaggttcttac tacccatctacccttcacgccccgcacaaaccctgcatggctcgcttcctccgatcgtct aatgtcccagaatcctccctgccaccctccatcggccctccgccgacctcctaccccagt gaccctcagacgccacacccgccttcctcctcttcctcggggtacccaccgcacccgcct agagatcggatgggtcccgccttccacgcccacccggggcagccccagtatgggcctctg gctcctgctcatggggtttatgctcccctgtatgacagcaggagagtatggaggcctcag ctttaccacagagaggatgccaggagtaactcactgcccccagaggtgctgcattcctct gtctaccagcctccactcagggagagattcaactctctagatagcaactactgctctgga gctgaacaccgtgcagggctacacagggattacggtcgtgttcctctgggctacgaggat ctgttcagaaggaagcaggagcagtgggctcatcatcaccatcatcacaacaccaacaga ccttcccagtcctcccccatcttcaccatcgattttgcaactgagcacgtagagagcagc ggaggccaatgcgtggggtgcaggttcagaggcgaggaaagcttagcgcactactccccg tggtcctgcggtaccatcggcccctgcctcagcccctttgagcctgaaacgctcacacac acttcagctcactcctgctctgaacactcggagttagacagcaatggagggggaggcgga ggcgtcggtggcagcagcgtcgggaagcggtggctgcattcgctggatcactaccgccgc ctgaaggacgaggacccgatcattcccttcagcgaggggcccattatctccaagtggggc gccatatccagggcgtcgcgcacgggctaccacaccaccgaccctgtccaagccacagcc tgccagagcagtgccagcaccacgcccatcaactttaaagattacaacccccatttggat cagagtgactacaggtggagctccagaggatcagactcctccagccactccagtttcctt gaaagtgagcagctctgtgcatcggagctgcacggccgtcgaacttcaataagtagtgga gagaaaatggtttctgatctgcaagcccatcagaccacctatagccaggatcgggaccgg gctgagagcgagtcagacccagaccgggacattgagctcgaactgtgcgctctggacatg gaggattcagaccaccaggagatcaagtctcaggagtctttagacctggctaccccacag tctcaggatgcttcccacctcctcccacctccctgctcctctcccctcctctcatcccct gtagaggatcacccccaaacagagggtccttcaacagaaaagatggatgctcacctgttg aaaaagatggccttcaggaagtctctgtctcctggagggttggtctcaggaggcctgggt gttggcaaactggtgctgcggactggaccttctcgactgggggacgcctccacccggggt tgtccggaaacgcctgggacagagatgctactcaatggaagctaa

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