Lates calcarifer (barramundi perch): 108879284
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Entry
108879284 CDS
T04895
Symbol
sh2d3ca
Name
(RefSeq) SH2 domain-containing protein 3C isoform X1
KO
K23690
SH2 domain-containing protein 3C
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108879284 (sh2d3ca)
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
108879284 (sh2d3ca)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2
RasGEF
DUF7145
Motif
Other DBs
NCBI-GeneID:
108879284
NCBI-ProteinID:
XP_018526032
UniProt:
A0AAJ7LKU1
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Position
LG9:complement(8912245..8962021)
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AA seq
949 aa
AA seq
DB search
MSMRKLSFKWLGSLTNLSFRRSSDKSDSKSSKLKSEGLPGDGSDSATVSTKILAPVAETT
VDDLGAMRPRTASYVRSSESYTHVGTLPRLLRMKRDKSNKGGPSSSKKSKDKSNISRSQS
QRPVQDKDHAPPRITAASFKETRDEAAGKADTRPDQHSLTDPKMQLKPTDELDVKTTQNV
TSESEGVCEDVSPSGGPSATLQPETCKEQEITQAAADLNPEKMSSPPPSHESDHTESHED
DGLESGLVKTKTVETVEDNSEHTEVTKGPDGNQNSDSINSHMEPAESQADYVQFSKEKYL
LESPPEKLRKELEEELKLSPADIRSHGWYHGHIPREVSETLVLRNGDFLVRDSLTSVGDY
VLTCRWNNEVLHFKISKVLVKSNETKVQYMLETDSFDSVQELVRFYVGQRKPVSQSNGVH
IYCPVSRTLPLRYLEATFSLSNSKQGSAYSPSSQRGAYIKRRSVTMTDGLTTEKMIPHSP
STIHHHKDAMRNCAMSMDQIQEYRCPLSPVGETPLSPAYSAITRQRAHSGGRVLAVVPPS
PVMRRSSDPQLSPSAGNNPPEHPAHTTHSAHSSPAHHPGYQSHSSETAGSYCDLRPCPAG
PPKPPAKSYVERLRVEEGREEGAREEGEGMFCAPQVETASSFKPSRYESCLMPAENKPLE
MSVLKRVKELLAEVDARTAAKHITMVDCSVARILGVTSEMQRMMGVSSGLELLTLPHGHQ
LRLDLLERFYTMSIMMAVDLLGCTGSTEERAALLHKTIQLAAELKSNLGNMFGFAAVMRA
LELPQISRLEQTWVTLRQRHTEGAILYEKKLKPFMKNMNDGKESSVLSNTSFPHIIPVLS
LLERGVALGEALEPWESAEVGVDVVMYHLEAARTVAHHGGIYRTNAETKLQGVQERAEIH
EIFQTEFQMRLLWGSRGSEGSQSERYEKFDKVLTALSHKLEPPVRHSEL
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgcggaaactgagtttcaagtggcttggcagcctcaccaacctctcttttcgc
cgctctagtgacaaatctgactccaagtcttctaagttgaagtcagaaggtttacctgga
gatggcagtgacagtgctactgtctccacaaagatcctggctccagttgctgagacaaca
gtggatgacttgggtgccatgcgtcctcgcacagccagctacgtccgctccagcgagagc
tacacacacgtgggcacactgccacggctactgaggatgaagagggacaagagtaataag
ggaggccccagcagcagtaagaagagtaaagacaagagcaacatcagcagaagtcaaagc
cagcgacctgtacaggacaaagaccatgcccccccgaggatcacagccgcctcattcaaa
gagaccagagatgaagctgcaggtaaagctgacactaggcccgaccaacactctctcact
gatcccaagatgcagctcaaaccaacagatgaacttgatgtcaagaccacccaaaacgtc
acctctgaatccgaaggtgtctgtgaagatgtgtcgccatctggtggccccagcgctaca
ctccagccggagacttgcaaagagcaagaaatcacccaggcagctgcagacctgaaccct
gagaaaatgtcatcacctccaccgagtcatgagagtgatcacactgagagtcatgaggat
gatgggttagagtctggacttgtaaaaacaaagacagtagaaacagtagaggacaactca
gagcacacagaggtgaccaaaggaccagatggaaaccaaaactctgacagcatcaacagc
cacatggagccagcagaaagccaggctgactatgtccagttctccaaggagaagtacctg
ctggagtctcctcccgagaaacttcgcaaggagctggaggaggagctgaaactgagccct
gctgacatcaggagccatggctggtaccatggacacatacccagagaggtgtcagagact
ctggttttgcgaaatggagatttcttggtgcgtgactctctgaccagcgtgggtgactat
gttctgacctgtcgatggaataacgaggtgctgcacttcaagattagcaaagtcctggtc
aaatccaatgagaccaaggtgcagtacatgttggagactgacagtttcgactcggtccaa
gagcttgttcgcttctacgtgggccagcgcaaaccggtctcccagtccaacggcgtccac
atctactgtccagtcagcaggactctccctctgcgctacctggaggccaccttttcactg
tccaacagcaagcaaggctccgcctactcgccgtccagtcagaggggggcgtacatcaag
agacggagcgtcaccatgactgatgggctgaccacagagaaaatgatacctcacagcccg
tcgacaatccaccaccacaaagacgcaatgcggaactgtgcgatgagcatggaccagatt
caggagtatcgctgccctttgtcacctgttggagaaaccccgctgtctcctgcgtatagt
gctatcaccaggcagagagcccactcaggtggacgggtcctggccgtcgtcccaccctcc
cctgtgatgcggcgctccagcgacccccagctcagcccctcggctggcaacaacccccca
gagcatcccgcgcataccacgcactcggcccactcctcgcccgcccatcatcccggctac
caatcacattcctcagaaacagcagggagctactgtgacctcagaccttgccctgccggg
ccccccaagcccccggctaagagctacgtggagcggttgcgagtcgaggaagggagggag
gagggagcgagggaggaaggagaggggatgttctgcgccccacaagtggagacagcatct
tcattcaaaccatccaggtacgagtcttgcctcatgccggccgagaataagcccctggag
atgtcggtgctgaagagagtcaaagagctgctggctgaggtggatgcaaggactgcagct
aaacacatcaccatggtggactgctcggtggctagaatattgggcgtaacttcagagatg
caaaggatgatgggagtttcctcagggctggagttactgacacttccacatggacaccag
ctgagacttgacctactggagaggttttacaccatgtctatcatgatggcagtggacctg
cttggctgcacaggaagcacggaggagagggcggccctgctccataagaccatccaatta
gcagctgagctgaaaagcaacctgggcaacatgtttggctttgctgctgtcatgagagcc
ctggagctgccgcagatttcccgcctggagcagacgtgggtgacgttacggcaaagacat
acagagggtgctattttatacgagaagaaactcaaacctttcatgaagaatatgaacgat
ggcaaagagtccagtgttctgtccaacacctccttcccccacatcattcccgtcctgtcc
cttctggagcgaggggtggctctcggggaggcgttggagccatgggagagcgcagaggtc
ggcgtggacgtggtcatgtaccacctagaggcagctcgtaccgtcgcgcatcacggggga
atctacagaaccaacgctgagaccaaactgcaaggagtccaggagcgggcagaaatccac
gagatcttccagacggagttccagatgcgtctcctgtggggcagccgtggctccgagggc
agccagtcggagcgctacgagaagtttgacaaggtcctcaccgccctgtcgcacaagcta
gagcctcctgtgcgccacagcgagctatag
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