Lates calcarifer (barramundi perch): 108879328
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Entry
108879328 CDS
T04895
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108879328
Pattern recognition receptors [BR:
lcf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108879328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
108879328
NCBI-ProteinID:
XP_050925088
UniProt:
A0AAJ8B4F4
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MNQSEDREEGVPPSKTTLCGEHESQTKAQSPEQQHSPHSAGPGPGPGPGPSCVSTKSNKS
MDRPQNFRKSVDGSFRIQQQRPDSPEPSCLSLKSDRSKNWLIEFKGRRPSADQIVDQESS
ELPSGQSAQQHQTHLDSIFMLLEENIVTFVKNELKKIQKVLSPDYPECLESQREDEEVLD
GEDEEQRRSSREEFLKITLNFLRRMKQEELADCLQSRHVAAVCRRKLKSNLKKKFQCLFE
GISKAGNPTLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKPDRPETTIRQEDIFKAS
PGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKEKKLS
LVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVLL
TNLIRGKLLPSARLWITTRPAAANQIPPECVDMVTEVRGFTDPQKEEYFRKRFRDEDQAS
RIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKTREGGELPKTLTQMYIHFLVVQTKLK
NIKYDGGSGTDPHWSPKSRKMIESLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSG
VFTQIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFINSGVNLLSEEQPTSLWSKLFK
DKSTLFYQSAVDKALQSPNGHLDLFLRFLLGLSVQTNQTLLRGLLTQTGSGSWTNQETIQ
YIKKKIEETPSAEKSINLFHCLNELNDRSLVKEIQQSLSSGRLSTDKLSPAQWSALVFIL
LSSEKDLDVFDLKKYSASEEALLRLLPVVKASNKALLSDCNLSKRSCEALSSVLSSQSSS
LRDLDLSNNNLQDSGVKMLSVGLESPHCSLETLRLNQTSLTEKSCQEISSVLSSQSSSLR
DLDLSNNNLQDSGVKMLSVGLESSHCSLETLSLSGCLITEEGCSSLVSALRSNPSHLREL
DLSYNHPGDSGVKLLSAGLEDPDWRLDTLRVEPGGVRWLTPGLRRYSCQLTIDTNTVNRF
LKLSDNNRKVTRVRKDQSYPDHPDRFDQWSQLLCRTGLTGRCYWEVEWRGRVDISVSYGG
IGRKEGSDCRFGLNDQSWSLRCSEGGYSVCHRKCVTCVPSSSSSSVSNRVAVYVDCPAGS
LSFYRVSSDSLIHLHTFNTTFTEPLYPGFRVWSWSSGSSVSLC
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagagtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaacatgagagccagaccaaagctcagagcccagagcagcagcactcaccacactctgct
ggacctggacctggacctggacctggacccagctgtgtgtccacaaagagcaacaagtca
atggatcgtcctcagaactttagaaagtctgttgatggaagtttcaggatccagcagcag
agaccagactctcctgaacccagctgtctgtctttaaagagtgaccggtcaaagaactgg
ttgattgagtttaaagggcgacgtccatcagctgatcagatagtggaccaggagagctca
gagcttcccagtggtcagtctgcccagcagcatcaaacacacctggactccatatttatg
ctgctggaggagaacatcgtcacttttgtgaagaacgagctgaagaagatccagaaggtt
ctgagtccagattacccagaatgcttagagagtcagagggaggatgaggaggtgttggac
ggtgaggatgaagagcagaggaggagcagcagagaggagtttctgaagatcacactgaac
ttcctgaggagaatgaagcaggaggagctggctgactgtctgcagagcagacacgttgct
gcagtttgtcgacgtaaacttaaatctaacctgaagaagaagttccagtgtttgtttgag
gggatctctaaagcaggaaacccaacccttctgaatcagatctacacagagctctacatc
acagagggagggactggagaggtcaatgatgaacatgaggtcagacagattgaaacagca
tccaggaaaccagacagaccagaaacaaccatcagacaagaagacatctttaaagcctca
cctggaagagatgaaccaatcagaacagtgatgacaaagggagtggctggcattgggaaa
acagtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggacata
cacttcacatttccattcactttcagagagctgaatgtgctgaaagagaaaaagttgagc
ttggtggaacttgttcatcacttctttactgaaaccaaagaagcaggaatctgcaggttt
gaagagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggac
ttccacaacactgagatcctgactgatgttacagagtccacctcagtggacgtgctgctg
acaaacctcatcagggggaaactgcttccctctgctcgcctctggataaccacacgacct
gcagcagccaatcagatccctcctgagtgtgttgacatggtgacagaggtcagagggttc
actgacccacagaaggaggagtacttcaggaagaggttcagagatgaggatcaggccagc
aggatcatctcccacatcaagacctcacgaagcctccacatcatgtgccacatcccagtc
ttctgctggatcactgctacagttctggaggatgtgttgaaaaccagagagggaggagag
ctgcccaagaccctgactcagatgtacatccacttcctggtggttcagaccaaactgaag
aacatcaagtatgatggaggatctgggacagatccacactggagtccaaagagcaggaag
atgattgagtctctgggaaaactggcttttgatcagctgcagaaaggaaacctgatcttc
tatgaatcagacctgacagagtgtggcatcgatatcagagcagcctcagtgtactcagga
gtgttcacacagatctttaaagaggagagaggactgtaccaggacaaggtgttctgcttc
gtccatctgagtgttcaggagtttctggctgctcttcatgtccatctgaccttcatcaac
tctggagtcaatctgctgtcagaagaacaaccaacctccctgtggtctaaactgtttaaa
gacaaatcaacacttttctaccagagtgctgtggacaaggccttacagagtccaaatgga
cacctggacctgttcctccgctttctcctgggtctttcagtgcagaccaatcagactctc
ctacgaggtctgctgacacagacaggaagtggttcatggacgaatcaggaaacaatccag
tacatcaagaagaagattgaagagactccctctgcagagaaaagcatcaacctgttccac
tgtctgaatgaactgaatgatcgttctctagtgaaggagatccaacagtccctgagttca
ggacgtctctccacagataaactgtctcctgctcaatggtcagctctggtcttcatctta
ctgtcctcagaaaaagatctggacgtgtttgacctgaagaaatactctgcttcagaggag
gctcttctgaggctgctgccagtggtcaaagcctctaacaaagctctactgagtgactgt
aacctctcaaagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagt
ctgagagatctggacctgagtaacaacaacctgcaggattcaggagtgaagatgttgtct
gttggactggagagtccacactgttcactggagactctcaggttgaatcaaaccagtctt
acagagaaaagctgtcaggagatatcatcagttctcagctcccagtcctctagtctgaga
gatctggacctgagtaacaacaacctgcaggattcaggagtgaagatgttgtctgttgga
ctggagagttcacactgttcactggagactctcagcctgtcaggctgtctgatcacagag
gaaggctgttcttctctggtctcagctctgagatccaacccctcccatctgagagagctg
gacctgagctacaatcatccaggagactcaggagtgaagctgctgtctgctggactggag
gatccagactggagactggacactctcagggtggagcctggtggagtccgatggttgaca
ccaggtctgaggaggtattcctgtcaactcacaatcgacacaaacacagtgaacagattc
ctcaaactgtctgacaacaacaggaaggtgacacgagtgagaaaggatcagtcatatcct
gatcatccagacagatttgatcagtggtctcagctgctgtgtagaactggtctgactggt
cgctgttactgggaggtcgagtggagaggaagggttgatatatcagtgagttatggagga
attggaaggaaagaaggcagtgactgtaggtttggactgaacgatcagtcctggagtctg
agatgctctgagggtggttactctgtttgtcacagaaagtgtgtaacatgtgttccctcc
tcctcctcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgctggctct
ctgtccttctacagagtctcctctgactctctgatccacctccacaccttcaacaccaca
ttcactgaacctctgtatcctgggtttagagtctggtcctggtcctctggttcctcagtg
tctctgtgttga
DBGET
integrated database retrieval system
