Lates calcarifer (barramundi perch): 108879338
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Entry
108879338 CDS
T04895
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like isoform X2
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108879338
Pattern recognition receptors [BR:
lcf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108879338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
WHD_NOD2
PRY
LRR_6
SPRY
LRR_4
DFF-C
Motif
Other DBs
NCBI-GeneID:
108879338
NCBI-ProteinID:
XP_018526093
UniProt:
A0AAJ7LN20
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MNQSEDREEGVPPSKTTLCGEHESQTKAQSPKNQRPDFAKPGPGPGPSCLSMKSDWSMDR
PHNFRKSVDGRIQQQRPDSPEPSCLSLKSDNSKGLDVNFKGRRPSADQIVDQESSEVPSG
QSAQQHQTHLDSIFMLLEKNIVTFVKKELKKMQKVLSPDYPECLESQREDEEVLDGEDEE
QRRSREEFLKITLNFLRRMKQEELADCLQSRHAAAVCRHKLKSNLKEKFQCLFEGISKAG
NPTLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKPDRPETTIRQEDIFKASPGRDEP
IRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKEKKLSLVELVH
HFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVLLTNLIRG
KLLPSARLWITTRPAAANQIPPECVDMVTEVRGFTNPQKEEYFRKRFRDEDQASRIISHI
KTSRSLHIMCHIPVFCWITATVLEDVLKTREGGELPKTLTEMYIHFLVVQSKLKNVKYDG
GSGTDPHWIPKSRKMIESLGKLAFEQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIF
KEERGLYQDKVFCFVHLSVQEFLAALHVHLTFIKSGVNLLSEEQPTSLWSKLFRNKPEPT
LFYQSAVDKALQSPNGHLDLFLRFLLGLSLQTNQTLLRGLLTQTGSGSETNQETIRYIKK
KIEETPSAEKSINLFHCLNELNDRSLVEEIQQSLRSGRLSTDKLSPAQWSALIFILLSSE
KDLDVFDLKKYSASEEALLRLLPVVKASNKALLSDCNLSERSCEALSSLLSSQSSSLRDL
DLSNNNLQDSGVKMLSVGLESPHCSLETLRLSGCNLSERSCEALSSVLSSQSSSLRDLDL
SNNNLQDSGVKMLSVGLESSQYQLIRVEPGGVRWLTPGLKKYSCRLTIDTNTVNRFLKLS
DNNRKVTHVKEDQSYPDHPDRFDLWPQLLCRTGLTGRCYWEVKWRGVVFISVSYRGIRRK
GDSDCLFGLNDQSWTLRCSDDGFSVWHNKRETSISSSSVSNRVAVYVNCPAGSLSFYRVS
SDSLIHLHTFNTTFTQPLYPGFRVWPGSSVSLC
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagagtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaacatgagagccagaccaaagctcagagcccaaagaatcagagaccagactttgctaaa
cctggacctggacctggacccagctgtttgtccatgaagagcgactggtcaatggatcgt
cctcataactttagaaagtctgttgatggaaggatccagcagcagagaccagactctcct
gaacccagctgtctatctttaaagagtgacaactcaaagggcttggacgttaactttaaa
gggcgacgtccatcagctgatcagatagtggaccaggagagctcagaggttcccagtggt
cagtctgcccagcagcatcaaacacacctggactccatatttatgctgctggagaagaac
atcgtcacttttgtgaagaaggagctgaagaagatgcagaaggttctgagtccagattac
ccagaatgcttagagagtcagagggaggatgaggaggtgttggacggtgaggatgaagag
cagaggaggagcagagaggagtttctgaagatcacactgaacttcctgaggagaatgaag
caggaggagctggctgactgtctgcagagcagacacgctgctgcagtttgtcgacataaa
cttaaatctaacctgaaggagaagttccagtgtttgtttgaagggatctctaaagcagga
aacccaacccttctgaatcagatctacacagagctctacatcacagagggagggactgga
gaggtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaaccagacaga
ccagaaacaaccatcagacaagaagacatctttaaagcctcacctggaagagatgaacca
atcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacagaag
ttcactctggactgggctgaagacaaagccaaccaggacatacacttcacatttccattc
actttcagagagctgaatgtgctgaaagagaaaaagttgagcttggtggaacttgttcat
cacttctttactgaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtg
ttcatctttgacggtctggatgagtgtcgacttcctctggacttccacaacactgagatc
ctgactgatgttacagagtccacctcagtggacgtgctgctgacaaacctcatcaggggg
aaactgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatc
cctcctgagtgtgttgacatggtgacagaggtcagagggttcaccaacccacagaaggag
gagtacttcaggaagaggttcagagatgaggatcaggccagcaggatcatctcccacatc
aagacctcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgct
acagttctggaggatgtgttgaaaaccagagagggaggagagctgcccaagaccctgact
gagatgtacatccacttcctggtggttcagtccaaactgaagaatgtcaagtatgatgga
ggatctgggacagatccacactggattccaaagagcaggaagatgattgagtctctggga
aaactggcttttgagcagctgcagaaaggaaacctgatcttctatgaatcagacctgaca
gagtgtggcatcgatatcagagcagcctcagtgtactcaggagtgttcacacagatcttt
aaagaggagagaggactgtaccaggacaaggtgttctgcttcgtccatctgagtgttcag
gagtttctggctgctcttcatgtccatctgaccttcatcaagtctggagtcaatctgctg
tcagaagaacaaccaacctccctgtggtctaaactgttcagaaacaaacctgaaccaaca
cttttctaccagagtgctgtggacaaggccttacagagtccaaatggacacctggacttg
ttcctccgcttcctcctgggcctttcactgcagaccaatcagactctcctacgaggtctg
ctgacacagacaggaagtggttcagagaccaatcaggaaacaattcggtacatcaagaag
aagattgaagagactccctctgcagagaaaagcatcaacctgttccactgtctgaatgaa
ctgaatgatcgttctctggtagaggagatccaacagtccctgagatcaggacgtctctcc
acagataaactgtctcctgctcaatggtcagctctgatcttcatcttactgtcatcagaa
aaagatctggatgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgagg
ctgctgccagtggtcaaagcctctaacaaagctctactgagtgactgtaacctctcagag
agaagctgtgaagctctgtcctcacttctcagctcccagtcctctagtctgagagatctg
gacctgagtaacaacaacctgcaggattcaggagtgaagatgttgtctgttggactggag
agtccacactgttcactggagactctcagactgagcggctgtaacctctcagagagaagc
tgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagatctggacctg
agtaacaacaacctgcaggattcaggagtgaagatgttgtctgttggactggagagttcc
caatatcagctgatcagggtggagcctggtggagtccgatggttgacaccaggtctgaag
aagtattcctgtcgactcacaatcgacacaaacacagtgaacagattcctcaaactgtct
gacaacaacaggaaggtgacacatgtgaaggaggatcagtcatatcctgatcatccagac
agatttgatctgtggcctcagctgctgtgtagaactggtctgactggtcgctgttactgg
gaggtcaagtggagaggagtggtttttatatcagtgagttacagaggaatcagaaggaaa
ggagacagtgactgtttgtttggactgaacgatcagtcctggactctgagatgttctgat
gatggtttctctgtctggcacaataagagagaaacatctatctcctcctcctctgtctct
aacagagtagcagtgtatgtgaactgtcctgctggctctctgtccttctacagagtctcc
tctgactctctgatccacctccacaccttcaacaccacattcactcaacctctgtatcct
gggtttagagtctggcctggttcctcagtgtctctgtgttga
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