KEGG   Lates calcarifer (barramundi perch): 108879478
Entry
108879478         CDS       T04895                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lcf03016]
    108879478
Enzymes [BR:lcf01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     108879478
Transfer RNA biogenesis [BR:lcf03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    108879478
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH FMN_dh zf-CCCH_2
Other DBs
NCBI-GeneID: 108879478
NCBI-ProteinID: XP_018526278
UniProt: A0AAJ7LL45
LinkDB
Position
LG3:complement(14047245..14053706)
AA seq 639 aa
METAASDTAGSGRDVAVKGEAAIKPEFLTTKEKFHGFVDSEWQGSKGEQASDNGTVEETK
EACVEEPEAKKLKLDPEERTKGWKQDGKRLRGQNKSRPHTKPTTYDEKRLCLSVIQANRE
CPFGDKCHFYHDVAEYMSSKPADIGESCYLYDTFGKCAYGLSCRFAKAHTTPDFKTMENT
DLVKACEGKNPVKNSLSKDLQNCLRKRSVSFKKSAEYLKTLSNNRDNKQQQGNGEACVAK
VSADPTGAEQRVATEGETQSSPDKPPPVKTVGPLTDADVIKLRQCEKKQVDFRDKLYLAP
LTTCGNLPFRRVCKRFGADITCGEMAMCTNLLQGQQSEWALLKRHESEDLFGVQVEGCFP
DTMTRCAELINNNTDVDFVDINSGCPIDLVYKKGGGCGLMTRTRKFEQIVKGMNYVLDVP
LTVKIRTGVQEKSNIAHKLIPEMKNWGVSMITLHGRSREQRYTKLADWDYITTCSKLASP
VPLFGNGDILSYEDAMKARETGVSGIMIARGALIKPWIFTEIKESRHWDISSSERLDILR
DFTNFGLEHWGSDTRGVEKTRTFMLEWLSFMCRYIPVGLLERVPQKINERPPYYMGRNYL
ESLMASQNVGDWVRISEMLLGPVPKNFNFLPKHKANAYK
NT seq 1920 nt   +upstreamnt  +downstreamnt
atggaaacagcggccagtgacacagctggaagtgggagggatgtggctgtaaagggtgaa
gccgccatcaaaccagaattcctaacaaccaaagaaaaatttcatgggtttgtagactct
gagtggcagggctcaaaaggagaacaggccagtgataatggcacagttgaggagacaaag
gaggcctgtgtggaggagcctgaagctaaaaagctcaaactagacccagaggaaaggact
aaagggtggaagcaagatggtaaacgccttcgaggacaaaataagtcaaggccacacact
aagcctacaacctatgatgaaaaacgactgtgtctctcagtcattcaggccaatagggaa
tgtccctttggagacaaatgccacttttatcatgacgttgctgagtacatgtcctctaag
cctgctgacattggcgaaagctgctacctctatgacacgttcggaaagtgtgcttatggt
ctctcctgccgcttcgccaaggcgcacactacaccggacttcaaaaccatggagaacacg
gatctagtcaaggcttgtgaaggcaagaacccggtgaagaacagcttgagcaaagacctc
cagaattgtctgaggaagcgttcggtgtcctttaagaagtcagcggagtacctgaaaaca
ctttcaaacaacagagacaacaaacaacagcaagggaacggcgaagcttgtgtagccaaa
gtatctgccgatccaacaggagcggagcagcgtgtggctactgaaggagaaacacagtcc
agcccagataaaccaccaccagtgaagactgtcggcccactgactgatgctgatgtcatc
aaactgcgtcagtgtgaaaagaaacaggtggactttcgagacaagctctaccttgctcct
ttaacaacatgtggcaatctgcctttccgtcgtgtgtgcaagcgctttggcgcagacatc
acctgtggcgagatggccatgtgcacgaacctgctgcagggtcagcagtcagagtgggcc
ctcctcaagagacacgagagtgaagatctttttggcgtccaggtggagggctgcttcccc
gacaccatgacgaggtgtgcagagctcatcaacaacaacactgatgttgactttgtggac
atcaactctggatgccctattgatcttgtctacaagaagggtggaggctgtggcttgatg
acgcgcaccagaaagtttgaacaaatagtcaaaggaatgaattatgtccttgatgtccct
ttaacagtcaagatccgcactggtgttcaggagaagagcaacatagcacacaagctcatc
ccagagatgaaaaattggggcgtctccatgatcacattgcatggccgatccagagagcag
cgctacaccaagttagctgactgggactatatcaccacttgctccaagctggccagtcct
gtcccactctttggaaatggagacattctgtcctatgaagatgccatgaaagcgagagag
accggagtttctggtattatgattgcaaggggtgctctcattaagccctggattttcact
gagataaaggagagcagacactgggacatctcgtccagcgagcgactggacatcctcagg
gatttcaccaactttggtctggagcactggggctccgacactcgaggtgtggagaagacc
cgcaccttcatgctggagtggctctccttcatgtgcagatatattccagtaggcctgttg
gagcgagtgcctcagaaaatcaatgagcgacctccgtactacatgggcagaaactaccta
gagtcactgatggccagtcaaaacgtaggggactgggtcaggattagtgaaatgcttctt
ggacctgtaccgaagaatttcaactttttgcccaaacacaaagccaatgcctacaagtga

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