Lates calcarifer (barramundi perch): 108879588
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Entry
108879588 CDS
T04895
Name
(RefSeq) GDP-mannose 4,6 dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00051
Fructose and mannose metabolism
lcf00541
Biosynthesis of various nucleotide sugars
lcf01100
Metabolic pathways
lcf01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
108879588
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
108879588
Enzymes [BR:
lcf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
108879588
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NmrA
Polysacc_synt_2
Motif
Other DBs
NCBI-GeneID:
108879588
NCBI-ProteinID:
XP_018526425
UniProt:
A0AAJ7LLB0
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Position
LG17:complement(25715677..25869462)
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AA seq
371 aa
AA seq
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MAQCSEPANVSSALNGAPKKERKVAVITGITGQDGSYLAEFLLAKGYEVHGIMRRSSSFN
TGRIEHLYQNPQTHTEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA
EYTANVDGVGTLRLLDAIKTCGLTNSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGA
AKLYAYWIVVNFREAYNMFSVNGILFNHESPRRGSNFVTRKISRSVAKIHLGQLESFSLG
NLDSKRDWGHAKDYVEAMWLMLQQEEPEDFVIATGEVHSVREFVEKAFKHVGKTVVWEGK
DENEVGRCQETGVVHVKVDPKYFRPTEVDYLQGDSTKAYQKLGWKPKVTFEELVKEMVDA
DVELMKKNPNA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgctccgagcctgctaacgttagctccgcgctgaacggagcgccaaagaag
gagagaaaggtggctgttatcaccggcatcaccggacaggatggttcctacctcgcggag
ttcctgctcgccaaaggctatgaggttcatggtattatgcgtcgttccagctcctttaac
actggccgcattgagcatctttaccagaacccccagacgcacactgagggcaacatgaag
ctgcattatggcgatctgactgacagcacgtgtctggtgaagatcatcaacgaggtgaag
cccacagagatctacaacctcggtgctcagagtcacgtcaagatctcgtttgatttggct
gagtacaccgctaacgtggatggcgtaggtaccctccgtctcttggacgccataaagacg
tgcggtctgaccaacagcgtaaaattctaccaggcctccaccagcgagctgtacggcaaa
gtccaggagatccctcagaaggaaaccactcccttctaccctcgctcaccttacggtgcc
gcgaagctttatgcctactggatcgtggtgaactttcgagaggcctacaacatgttctct
gtcaacgggatcctctttaaccacgagagcccgaggagaggctcaaactttgtgacgcgt
aagatcagtcgctctgtggcaaagattcacctgggccaactggagagcttcagcctgggc
aacctggactccaagagggactggggccacgccaaagactacgtggaggcgatgtggctg
atgctgcaacaggaggagccagaggatttcgtcatagcgacgggggaggtgcacagcgtg
agggagtttgtagagaaggccttcaaacatgtggggaagactgttgtgtgggagggaaaa
gatgagaatgaggttggtcgctgccaggagacaggagtggtacatgtgaaggtggacccc
aaatacttccgccccactgaagtggactacctacaaggtgacagcaccaaagcgtatcag
aagttgggttggaagccaaaggtgacttttgaggagctggtgaaggagatggtggacgca
gacgtggagctaatgaagaaaaacccaaacgcctga
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