Lates calcarifer (barramundi perch): 108879624
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Entry
108879624 CDS
T04895
Symbol
pax4
Name
(RefSeq) paired box protein Pax-4
KO
K08032
paired box protein 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108879624 (pax4)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108879624 (pax4)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
HTH_32
HTH_28
HTH_29
FAF1
Fe_dep_repress
DUF6683
MarR_2
Motif
Other DBs
NCBI-GeneID:
108879624
NCBI-ProteinID:
XP_050933609
UniProt:
A0A4W6CHF0
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Position
LG18:complement(7538953..7542860)
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AA seq
420 aa
AA seq
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MCGINTELQHKGGGSVNQLGGLFLNGRPLPESKRRKMIELASEGVRPSQISRILRVSNGC
VSKILSRYRRTGLLEPKTIGGSRPRLLTPGVISTIIQCKRENPTIFAWEIRQRLATARLC
KVSKVPSVSSINRILRKIHLDLGPMCMEINAHIRTEQDVESLIQQEMSQKEMLETACSSD
QKPKGVQHRNRTTFTPEQSRALEQEFSHSQYADMYIREKLSAKIKLPEDTIKVWFSNRRA
RWRREVKQRSSTQSAQSADLQKQRDSFAMIPVGPHSFTSQQATGVSAVYCQNADAFSSYN
TSARGLQNDCVFPTETGIRNSECLASVSVSPAHLHQSSNMMIQSVDRTPLALHNDGFTFP
LVHHPTDVRTSLSLTTETTRTDCPVTQCWNQQGISFTWSQFQTDERFLFSSQQLWDVNPH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggaataaacactgagctgcaacacaaaggtggtggaagtgtcaaccaactagga
gggctgtttctcaacggcagacctctgccagaatccaagaggaggaaaatgatagaactg
gcctcggaaggggtccgtccaagtcagatatccaggatacttcgggtgtccaacgggtgt
gtcagtaagatcctgagccgttaccgccgcacgggactcctagagcccaagaccattgga
gggagccggcctcggcttctcacccccggtgtcatctccactattatccagtgcaagagg
gaaaacccgactattttcgcttgggagattcgacaacggctggcaacagcgcgattatgc
aaagtctcaaaagttcccagtgtgtcatctataaatcgaattttaagaaagatccacttg
gacctcgggcccatgtgcatggagatcaatgcgcacatcagaactgaacaggatgttgag
tctttgattcaacaagaaatgagtcagaaagagatgcttgagacagcgtgcagcagtgat
cagaaacctaaaggtgtccagcacagaaaccgcaccaccttcaccccagagcagagcaga
gcactcgagcaagaattctcccacagccagtatgcagacatgtacataagagagaaactg
tccgccaaaatcaaacttcctgaggacaccattaaggtctggttttcaaacagacgggct
agatggaggagagaagtcaaacagaggagtagcacacaaagtgcacagtctgcagacctt
caaaagcaaagagattcatttgccatgattccagtagggccgcacagcttcacatctcag
caggcaacaggagtctcagcggtctactgtcaaaacgcagatgccttctcttcgtacaac
acatctgccaggggattgcaaaatgactgcgttttcccaacagaaacaggtattagaaat
tctgaatgtctggcatctgtctcagtttcgcctgcacacctccaccaatcaagcaacatg
atgatccaaagtgtagacaggactccactggccctccacaatgatggattcactttccca
ctggttcaccatcccacagatgtgaggacatccctctctttgacaactgagacaacaaga
acagactgtccagtgactcagtgctggaaccagcagggaatttctttcacttggagccag
tttcagacagatgagaggtttctgttttcttcccagcagctctgggatgtgaacccacac
tag
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