Lates calcarifer (barramundi perch): 108879641
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Entry
108879641 CDS
T04895
Symbol
atp2b1a
Name
(RefSeq) plasma membrane calcium-transporting ATPase 1a isoform X1
KO
K05850
P-type Ca2+ transporter type 2B [EC:
7.2.2.10
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108879641 (atp2b1a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108879641 (atp2b1a)
Enzymes [BR:
lcf01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
108879641 (atp2b1a)
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Gene cluster
GFIT
Motif
Pfam:
Cation_ATPase_C
E1-E2_ATPase
ATP_Ca_trans_C
Cation_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
Phage_tail_tube_init
Motif
Other DBs
NCBI-GeneID:
108879641
NCBI-ProteinID:
XP_018526498
UniProt:
A0AAJ7PIH4
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Position
LG18:complement(6800219..6835581)
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AA seq
1280 aa
AA seq
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MANNSYSGVKNSMVEANHDGEFGCTLKELRSLMELRGAEALSKIGESYGDIQGLCNRLKS
SPVDGLSGQPTDIEKRKTVFGQNFIPPKKPKTFLQLVWEALQDVTLIILEVAAIVSLGLS
FYKPPDAKRENCGRAAGGVEDENEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFRGL
QSRIEQEQKFTVVRGGQVIQIPVAEIVVGDIAQIKYGDLLPADGVLIQGNDLKIDESSLT
GESDHVKKTQEKDPMLLSGTHVMEGSGKMVVTAVGVNSQTGIIFTLLGGGEDDDDDEEEK
KKEKEEKKKQRKNKKQDGSVENRKKAKAQDGAAMEMQPLNSDEGADAEEKKKANLPKKEK
SVLQGKLTKLAVQIGKAGLVMSAITVIILVVLFVVDTFWIQNLPWDKDCTPIYIQFFVKF
FIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGT
LTMNRMTVVQAYLAEKHYKKVPEPESIPPSILDILILGIAVNCAYTTKIMPPEKEGGLPR
QVGNKTECALLGFSSDLKRDYQAIRNEIPEEKLYKVYTFNSVRKSMSTVLKMADGSYRMF
SKGASEILLKKCYKILTANGESKVFRPRDRDDMVKKVIEPMASEGLRTICLAYRDFPASE
GEPDWDNENDILTGLTCICVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARAIA
TKCGILQPGDDFLCLEGKEFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKG
IIDSTVAEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIV
KAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFAS
LALATEPPTEALLLRKPYGRNKPLISRTMMKNILGQGVYQLVIIFSLLFAGEKVFDIDSG
RNAPLHAPPSEHYTIVFNTFVMMQLFNEINARKIHGERNVFDGIFNNLIFCSIVFGTFIV
QIVIVQFGGKPFSCVALSIDQWLWCTFLGFGSLLWGQVISSIPTSRLKFLKTAGHGTQKE
EIPDEELEELEDMDEIDHAERELRRGQILWFRGLNRIQTQMDVVSAFQSGTSFQGALRRQ
ASNSSQQQHDIRVVNAFRSSISLYEGLEKPESRTSIHNFMTHPEFRIEDSEPHIPLIDDT
DAEDDAPTKRNSASPRNATPTPPSPTPSPVTTAAPTTPVSPSPNQNNNAVESSNHLLPEG
PKSGTPSAPGSPLHSLETSL
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaactcatacagcggggtgaagaactccatggtggaggccaaccacgatgga
gagtttggctgcacactcaaagaactgcgctcccttatggaactgagaggcgctgaggcg
ctaagcaaaattggggaatcttatggggatattcaaggactctgcaaccgattaaaaagt
tcacctgtagatggtctaagtggacagcctacagacattgagaagcgaaaaacagtgttt
gggcaaaattttataccacccaaaaagcccaaaactttcttacagttagtgtgggaggcg
ctacaggatgttacactgattatcctagaagtggcagccatagtttcactaggcctttct
ttttataaacctccagatgccaaaagagaaaactgtgggagggctgctggaggtgtggag
gatgaaaatgaggcggaagccggctggatcgagggagctgcaattcttctgtcagttatc
tgtgttgtgctggtgacagcattcaatgactggagtaaagagaagcagtttaggggcctc
cagagccgcatcgagcaggaacagaaatttactgtcgtccgtggaggacaagttattcaa
attcctgtggctgagatcgtggtcggcgacattgcacaaataaaatatggtgaccttttg
cctgctgacggagtcctcatccaaggcaacgatcttaagattgatgagagctcactcaca
ggggagtcggaccatgtcaagaaaacacaagaaaaagatccaatgctgttatcaggcacc
catgtaatggaaggctcagggaaaatggtggtcactgctgtgggtgtcaactctcaaact
ggaattatcttcactttacttgggggcggcgaggacgatgacgacgatgaggaggaaaag
aaaaaggaaaaggaggagaagaaaaaacagagaaaaaacaagaagcaggatggatctgtg
gaaaatcgtaagaaagctaaagcacaggatggtgctgctatggaaatgcagcctctgaac
agtgacgagggagccgatgcagaggagaagaagaaagccaacctgccaaagaaagagaag
tctgtcctccagggcaaactgaccaaactagctgtacagataggcaaagcaggactggtt
atgtcagccatcactgttattatcctggtggtgctgtttgttgtagacaccttctggatc
caaaatctgccctgggacaaggactgcacacccatttacattcagttctttgtgaaattc
ttcatcattggcgtcaccgttctggtggtggctgttcccgaaggcctgccgcttgctgta
acaatctccctggcatattccgttaagaaaatgatgaaagacaacaacctggtgcgtcac
ttggacgcctgtgagactatgggcaatgctaccgccatctgctctgacaagactggtact
ctcacaatgaaccgcatgactgtggtgcaggcctacttggctgaaaagcactacaagaaa
gtccctgaaccagagagcatccccccctccattttagacatcctgattctgggcatcgca
gtcaactgcgcctacaccaccaagattatgcctccagagaaagaagggggcctgccacgt
caggtgggcaacaagaccgaatgtgccttgcttggcttttcctctgacctgaagcgcgac
taccaagctatacgcaacgagatcccagaggagaaactgtacaaagtctacaccttcaac
tcagtccgcaagtctatgagcactgtgttgaagatggctgatggcagctaccgcatgttc
agcaaaggagcatcagaaattctcttaaaaaagtgctataaaatcctgacagcaaatggt
gagtccaaggtgtttcgcccacgggacagagatgacatggttaagaaagtgatcgagccc
atggcctcagagggtctgaggaccatctgccttgcatacagagatttccctgcctctgag
ggtgaacctgactgggacaatgaaaatgacatcctcactggattgacctgcatctgcgtc
gtgggcattgaagacccagtgagacccgaggtcccagacgctatcaggaaatgccagcgc
gctggcatcacagtgcggatggtgactggggacaacattaacacagctcgagccattgcc
accaagtgtggcatcctacaacccggagacgacttcctgtgcctggagggcaaagagttc
aaccgaaggatacgcaatgagaaaggagagattgaacaagagcgcattgacaagatctgg
cccaaactacgagtactggctcgctcttcacccacagacaaacacaccttagtgaaaggt
attatcgacagcacagtggcagaacagagacaagtggtagcagtgacaggagatggtaca
aatgatggtcctgccttgaagaaagctgatgtcggctttgccatgggtatcgctggcaca
gatgtagccaaagaggcatctgacatcatcctgactgacgacaacttttctagcatcgtc
aaagccgtcatgtggggacgcaacgtctacgacagcatttccaagttcctccagtttcag
ctaactgtcaatgtggtggctgtcatcgtagcatttacaggagcctgcatcacacaggac
tctccactgaaagcggtacagatgttgtgggtcaatctgatcatggacacctttgcttca
ctagctctggccacggagccccccacagaagccctgctgctaaggaagccatatggccgc
aacaagcctctcatctcccgcactatgatgaagaacatcctcggccagggagtgtaccag
ctagtcatcatcttttctctactctttgctggtgagaaagtgtttgacattgacagcggc
aggaacgcgcccctccacgccccaccctctgaacactacactattgtcttcaataccttt
gtaatgatgcagcttttcaacgagatcaatgcccgcaagatccatggtgaaaggaatgtc
tttgacggcatcttcaacaaccttatcttctgtagtattgtctttggtaccttcattgtc
cagatcgtcatagtacagtttggagggaagccattcagctgtgtggctctgtccatcgac
cagtggctgtggtgtactttcttaggctttggctctctactatggggacaggtaatctct
tcgataccaaccagccgcttaaaattcttgaaaacggcgggccacggcacccagaaggag
gagatcccagacgaggagctggaggagctggaggacatggacgagatcgaccacgccgag
cgggagcttcgccgaggccagatcctctggttccgaggcctcaatcgcatccagactcag
atggatgtagtgagtgcgttccagagtggaacttcctttcagggggctctaaggcggcag
gcctccaactccagccaacaacagcacgatatccgggtggtgaatgcattccgcagctcc
atctccctctatgaggggctggagaagcccgagtcgcgaacatcaatccacaacttcatg
acccaccccgaattccggatagaggactctgagccccatatccccctaatagatgacacc
gacgcagaggacgacgctccgaccaagcgcaactccgccagcccccgcaacgccacgccc
acgccgccctcgcccacgccttcgcccgtcaccaccgccgcccccaccacgccagtctcc
ccgtcccccaaccagaacaataacgctgtggagagcagtaaccacctccttccggagggc
cccaaatcaggaaccccctcggccccggggagccccctacacagcttggagacctccctt
tga
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