Lates calcarifer (barramundi perch): 108879648
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Entry
108879648 CDS
T04895
Symbol
hgfa
Name
(RefSeq) hepatocyte growth factor a isoform X1
KO
K05460
hepatocyte growth factor
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04020
Calcium signaling pathway
lcf04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108879648 (hgfa)
04020 Calcium signaling pathway
108879648 (hgfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108879648 (hgfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108879648 (hgfa)
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108879648 (hgfa)
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Growth factors (RTK binding)
108879648 (hgfa)
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Growth factors/receptors
108879648 (hgfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kringle
Trypsin
PAN_1
DUF1986
Motif
Other DBs
NCBI-GeneID:
108879648
NCBI-ProteinID:
XP_018526510
UniProt:
A0AAJ7LMG6
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All DBs
Position
LG18:7514981..7537111
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AA seq
722 aa
AA seq
DB search
MRTNVWIYHALVCVVVTILDTGSCRRTHQSLQRYEKTENHMLVCTDCPQPPLIRSSRSQE
HCARKCKKVKKNFNCRAFNFQRHNRKCHLLPFDRFTHGVKKEANVNFTLYEKKDYIRECI
VGTKDNYRGRRSWTKSNITCQAWSDNNINEHTFYPDRYPMQDLRENFCRNPNNDPGGPWC
YTTDPNVRAEECGLPQCSEEVCMLCNGEDYQGKMDHTESGKECQRWDSARPHKHNFQPKK
YRDKDLKDNYCRNPDNRLRPWCYTMDPKTPWEYCNITVCESESSEDTDVNVTTSCVQGRG
TDYRGTMNVTPEGVTCQRWDSQFPHNHSFLPQNFKCNLCVCYRDLRENYCRNPDGADYPW
CFTTDPNQRTANCTHIPRCDAEATQKIECYKDNGETYRGSLSITRSGIPCADWSHHINSG
DSHSTVSHVGLEKNYCRNPDRDKHGPWCYTNPNNRLAWDYCKLKHCESATVAPQPNTVTR
PKISCFVHINTRIVGGHQVRGTDGSWVVSIQREKAHLCGGSLIREDWVLTDQQCFTSCVP
DLRDYSVQVGLRHLNESSSHPRLHISRLICGPEGSNLVMLKLADPAPVSEGASTIHLPVT
DCHITEGTNCTMYGWGETKNTGYDEALNTVTMPMVDNDMCSQIKGDAGESRICAGGKRGE
GVCDKDNGGPLVCQEHERKVIIGVSIQRTKCASSQPALFVNVAFYSEWIYKVFKLYPSLE
RN
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaggacaaacgtatggatttaccacgctctggtgtgtgttgtggtcactatattggac
acaggttcctgtagaaggactcatcagtcattacagaggtatgagaagactgagaaccac
atgctggtttgcacagactgtcctcagccccctttgatacgaagcagccgatcgcaggag
cactgcgcccgcaagtgcaagaaggtcaagaaaaacttcaactgcagggctttcaacttt
cagaggcacaacaggaaatgccacttgcttccctttgaccgttttacccacggtgtgaag
aaagaggccaacgtcaacttcactttgtatgaaaaaaaagattatataagggagtgtatc
gtcggcaccaaggacaactacagagggaggaggtcttggacaaagtcaaacatcacttgc
caagcttggtcagataataacatcaatgaacacacgttttatcctgataggtacccaatg
caagacctgagggagaacttctgtcggaatcccaacaacgatcctggtggtccttggtgc
tacaccactgaccccaacgtacgagctgaggagtgtggattaccacagtgctcagaggaa
gtctgtatgttgtgtaatggggaggattaccagggcaaaatggaccatacagagagcggc
aaggagtgccagcgatgggactcagcgaggcctcacaaacacaacttccagcccaaaaag
tatcgggacaaagatttaaaagacaactactgtcgtaacccagataatcgactccgtccc
tggtgctacaccatggatcccaaaactccgtgggagtactgcaacatcactgtgtgtgag
tcggagtccagtgaggacacagatgtcaatgtaacaacatcctgtgtccagggaaggggc
acagattacagaggcacaatgaatgtcactcctgagggtgtgacatgtcagcgctgggac
tctcagttcccccataaccactcatttcttcctcagaacttcaaatgcaatttgtgtgtg
tgttacagagacctcagagagaactactgccgtaaccctgacggtgcagattacccatgg
tgcttcactacagaccctaatcagaggacagccaactgcacccacatccccaggtgtgat
gctgaggccacacagaaaatagagtgttacaaagacaacggagagacataccggggcagt
ttatcaataactcgttctgggattccctgtgcagactggtcacatcacataaacagtggg
gattctcactctacagtatcccatgtagggctggagaagaactactgccggaacccagac
cgggacaaacatggcccctggtgttacaccaatccaaacaaccgcttggcctgggactac
tgcaaactgaaacactgtgaatcagctacagtggctcctcaaccaaacactgtaaccaga
cccaagatatcatgcttcgtgcatataaacaccagaatagttggaggacatcaagtgcgt
ggtacagatggcagctgggttgtaagcatccaaagagagaaggctcatttgtgtggtggc
tctttgatcagagaagactgggttttgacagaccaacagtgcttcacctcctgtgttcca
gacctcagggattacagtgtgcaggtcggtctgcgccacctcaatgagtcctcaagccac
ccgagactgcacatctctcgtctgatttgtggcccagaaggatccaacctggttatgctg
aaactagcagatcctgctcctgtgtctgagggtgcctccactattcatctaccagtgaca
gactgtcacatcaccgaaggcaccaactgcaccatgtatggatggggggaaaccaaaaat
acaggatatgatgaggcgttgaacactgtgaccatgcctatggtcgacaatgacatgtgt
tcacaaatcaaaggggatgccggggaaagcagaatatgtgctggcggcaagagaggagag
ggtgtgtgtgataaagacaatggtggtccattggtctgtcaggaacatgagcgcaaagta
atcatcggtgtgagcatccaaaggacaaaatgtgcctcatcgcagcctgcactttttgtt
aatgttgctttctactcagagtggatatataaggtgttcaaactttaccccagtttggag
aggaactaa
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