Lates calcarifer (barramundi perch): 108879665
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Entry
108879665 CDS
T04895
Symbol
arhgap17b
Name
(RefSeq) rho GTPase-activating protein 17b isoform X1
KO
K20638
Rho GTPase-activating protein 17
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108879665 (arhgap17b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108879665 (arhgap17b)
Membrane trafficking [BR:
lcf04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108879665 (arhgap17b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR
RhoGAP
BAR_3
BAR_2
Motif
Other DBs
NCBI-GeneID:
108879665
NCBI-ProteinID:
XP_018526546
UniProt:
A0A4W6DRH0
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Position
LG11:11486586..11510085
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AA seq
815 aa
AA seq
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MKKQFNRMRQLANQTVGRAEKTEVLSDDLLQIERRMELVRLVSHNTHKRLVSCLQGQLGT
DTEKRHKKLPLTALSQAMQEGGGQLGDESLIGKMMDVCGEAESRLATELMQHEVQIERDI
LDPLNQLAEVEIPNILKQRKQLAKLVLDYDSAKTRFYQASKSNNQAMAAKADSLKDEMDE
ALNKVEICKDQLSADMYNFASKEGEYARYYVMLLEAQAEYHRRSLAALEAAIPTIQVQQD
SWTEKPAFGTALEEHLKRSNREIALPIEACVMMLLETGMKEEGLFRIAAGASKLKKLKAA
LDCSTSQLEEFYSDPHAVAGALKSYLRELPEPLMTFGLYDEWLQASNVSDSDKRLQALWV
TCDRLPKSHKANLRYLVKFLAKLAQDSEVNKMTPSNIAIVLGPNLLWAKTEGTLAEMAAA
TSVHVVAIIEPIIQHADWFFPEEVDFNVSGMFAMPTHPATPDPEPGMDRKRPGSLVGQDG
DSHTPRKDSTVNKQPEPTPRRASAVNRKQPQLTSPTFQPPLPPLEAWGATQPEPQPQASF
PVAENEQPGLSGAGGGVGGGGGGGLGGGVQVATVQPQVVTQLSAEESSPARELMSTPPPQ
RNGSVHLSVGAPHSQGGSRGPSPHMVRRGTKKQAPAPPKQASPFASQPSNTQTPGSPHHP
PITPRRHPSKDGPIHAPSHPPPQPPPPHQAQGESEPSPPSTPTPPDTPPHDGLHSNPLSY
HSGSLPRPSRPAPRPRPRPSMPPPPQPAANDNGNGLCSSASKIITDGGLVLKGIGRALVP
EVIVDQQGESFAGQEPAPTPAPPPDPYNETESTLL
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacaatttaatcgcatgaggcagctcgccaaccagactgtcggaagggctgag
aaaactgaggtgctgagcgatgaccttctacagatcgagaggcggatggagctggtgcgc
ctggtgtcgcacaacacgcacaagaggctggtgtcctgtctgcagggtcaactcggcaca
gacactgaaaagagacataaaaagttgcccctgacggcattgtcccaggccatgcaggag
ggaggaggccagctgggagacgagagtctgattggcaagatgatggatgtgtgtggggag
gcagagagtaggttagccactgaactgatgcagcatgaagtgcagatcgagagagacatc
cttgatcctcttaaccagctggcagaggtggagattcccaatatactgaaacagaggaaa
caacttgccaagctggttctggattatgactctgcaaagacaaggttctaccaggcatca
aagtccaataaccaggccatggcagctaaggcagattctctcaaagacgagatggacgag
gctctgaataaagtagaaatatgcaaggaccagctctctgcagacatgtacaactttgct
tccaaagagggagagtatgcacgctactatgtcatgttactagaggcccaggcagaatac
cacaggaggtctctggcagctctggaggcagctataccaacaatccaagtacagcaagac
tcctggacagagaagccggcgtttggtacggccctggaggagcacctgaagaggagtaac
cgtgagattgctctgcctattgaggcctgtgtcatgatgctgctggaaactggcatgaag
gaggagggactcttcagaatagccgctggagcttcaaagctgaagaagctcaaggcagcg
ctggactgttccacctcacagcttgaagagttttactctgatccccatgccgtcgccgga
gctttgaagtcctacctcagggaacttcctgaacctctaatgacttttggtctgtatgac
gagtggctacaggcctccaatgtgtcggactctgataagaggcttcaggccctgtgggtg
acatgtgaccgcttgccaaagagccacaaagccaacctcaggtatctggtgaagtttctt
gctaaactggctcaggacagtgaggttaataaaatgactcccagcaacatcgccattgtt
ctgggacccaacctgctttgggcaaagacagaggggacgctggcagaaatggcagcagct
acatctgtgcatgtggtcgccataattgagcccatcatccagcatgctgattggttcttc
cctgaagaggtggacttcaatgtgtcaggcatgttcgccatgcccacccacccagccacc
ccagaccctgaacctggcatggacaggaaacgccctggcagcctagtggggcaggacggg
gacagtcacactccccgtaaagacagcactgttaacaaacagccggagcccactccacgt
agagccagcgctgtaaatagaaagcagccacagctaacctcacccaccttccaaccccca
ctgccccctctggaagcttggggtgctacccagcctgagccccagccccaggcttcgttc
ccggttgcagagaatgagcagcctggcttgagtggagctggtggtggtgttggtggtggt
ggaggtggtggtctgggtggtggggtccaggtagccacagtacaacctcaggttgtaacc
cagctcagcgcagaggagagcagcccagcccgtgagctcatgtccaccccccctccccag
aggaatggttcagtccatctttcagtaggagccccccactctcagggtggatccaggggg
cctagtccacacatggtccgccgaggcaccaagaagcaggccccagccccgccaaaacag
gccagccccttcgcctcccaacccagtaacacccagacacccgggtcacctcatcaccca
cccatcacacccagacgccaccccagcaaagacggaccaatccacgccccgagccaccca
cccccgcagcctccgccgccccaccaggcccagggggagtcagagccctcacccccaagc
acacccacccctcctgacactccacctcatgacgggctccactccaacccgctgtcctac
cactctggatctctccctcgcccctctaggccggcaccgaggccacggccccggcccagc
atgccgccacccccacagcctgcagcgaatgacaatggaaatggcctctgcagctctgcc
tccaagatcataacagatggaggcctggtcctaaaggggattggacgagccctcgtcccc
gaggtgattgtggaccaacagggggaaagctttgctggtcaagagcccgcccccacccca
gccccacccccagacccttacaacgagacagagagcacccttctgtga
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