Lates calcarifer (barramundi perch): 108879708
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Entry
108879708 CDS
T04895
Name
(RefSeq) reticulon-3 isoform X3
KO
K20723
reticulon-3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108879708
03036 Chromosome and associated proteins [BR:
lcf03036
]
108879708
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108879708
Autophagy
ER-phagy
ER-phagy recepters
108879708
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108879708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
C2_SHIP1-2_2nd
Babuvirus_MP
Motif
Other DBs
NCBI-GeneID:
108879708
NCBI-ProteinID:
XP_018526601
UniProt:
A0AAJ7LLG9
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All DBs
Position
LG14:complement(1081844..1118543)
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AA seq
1112 aa
AA seq
DB search
MEPMTQSAQISSSQGFADGQNSAAKESKLSDSFLSSSPVSLIQSPQDKRVVLGSDKPCEG
VATSLRFPSQPGSFTPGHYGSEAGPPDGQPDSPIKTSPVSERIKALEALAAKKNEPDFRS
DGGFSHFRDRHYEKPVAETQKSPTETQKSPTKTQKRPSENQKAPTEKIVPTVQKKEGSAD
QESPESPFEVLGDLRQVNEFEETEEWMKTHLPPVPDFDGADLIKGTLTSDNVTSKEEKET
DIVIPDAPAAFAGVPDAFMDSPIETSDLRDEFSDAQKQASVEEESDFDLSFLPTAYMWDQ
QEKSGVQTQANLESELAASPAPPTGFGSPSPPISPPVDRNAKQNVLDDKKTTWTRDLEPP
EASEADSSGESDETVIEDCVTVPASVPLSFSDPAFTNDPTTTIASTTPNLPPEEKVTPPP
KSERKLMQVPTINVIETDEPNYSEEEMEMELEAEEDEDYEVVKDLAREAPKSPEPEPEDS
KNEPPKTRPLETEFMEGYSPPSSPVDSDVEYTPKHKILKSHLETVHQESTSKPNPTVSTN
SASDFSQAQSEKSQTTPNKVHDEPSTFMVTNEEVDFPDNEDEWSDEAQDILVRPFRTDLA
SKEPVPYTQSNMDEKNDTVIKESYMEMASLSKTSFMQDDIYDRQSFDYDYDASSPLDDID
DKGQNTAKERFLSDPSEIHIETLDTSTAQNDIPEENQNLGDLTSLTDSKTLSGINEQDFK
KKMTTDITSDNMENGNSLSAQKIDSKIQQDTIAGHHAPDATRNPESIDTDRSVSEPTDSF
VEFMRECLKSRQDEEHDKVHQSVSSKTEFSETGWLPSQSPPTMVMDLDQEQLTISALKEL
GSSQEEEVVSLESKVSDQDKANPNATSIQQSSFTSVPNLPRSQSDRAFDTTYSKEVEAID
EWVAEAYHLAEHVLTAILTHVSVKDLIHWRDPKKSGLVFGLSMLLLLSLAAFSVISVVSY
LLLALLCVTITFRIYKSVVQAVQKSNEGHPFKTLIDKDVSIPPETFRKHVDASLTYINRA
LKQMSRLFLVEDLVDSLKLAVVMWLLTYVGAVFNGITILILADILLFAVPPVYEKNKTQI
DQYIDLARTQVNTTIAKLQEKLPGAVKRSKTE
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaatgactcagtccgcccagatatcatcgtcgcaagggtttgccgatgggcag
aattccgctgccaaagaatcaaagctgtccgattcctttctttcctcttcgcctgtatct
ctcattcagtctcctcaagacaaaagagttgtcctgggctctgacaagccctgcgaaggt
gtagcgacatcccttcgctttccttctcagcctggctcattcacacctggtcattatggg
agtgaagcagggccgccagatggtcaaccggattcaccgataaagacatctcctgtttca
gagcgaattaaggcattggaagcacttgctgccaaaaagaacgaacctgattttagaagc
gatggaggtttctctcatttcagagatcgccactatgaaaaacctgttgctgagacccaa
aaatctcccactgagacccaaaaatctcctaccaagacccagaaacgtccctctgagaat
caaaaagctcccactgagaaaattgtgccaactgtccagaaaaaagaaggttctgctgat
caggagtcaccagaatccccttttgaagttcttggagatttaagacaagtgaatgaattt
gaagaaacagaagagtggatgaagactcatttaccccctgtgccagactttgatggtgca
gatttaatcaaaggcaccctgacttcagacaatgttacatcaaaggaggagaaggagact
gacattgttatacctgatgctcctgctgcctttgctggtgtccctgatgctttcatggat
tctcctatagaaacttcagatctgagggacgagttcagtgatgcacagaaacaggcaagt
gttgaggaggagtctgattttgaccttagttttttgccaacagcctacatgtgggatcag
caggaaaaatctggtgtccagacacaagcaaatcttgagtcagagcttgcagcttcacct
gcacctcccaccggctttggttccccatctcctcctatttccccaccagttgataggaat
gctaaacagaatgttttggatgacaagaagaccacttggaccagagatctagagccccca
gaggcaagtgaagcagacagctctggagagtcagatgaaacggtcattgaagattgtgtg
actgttcctgcatctgttcccctttcattttctgatccagcatttacaaatgatcctact
actactattgcttccacaactcccaatcttccccctgaggaaaaggtgacccctccacca
aagtctgagaggaagctaatgcaggttccaaccatcaatgttattgagacagatgaacca
aattacagtgaagaggagatggaaatggagcttgaagcagaggaagatgaggattatgag
gttgtgaaagatttggccagagaggctccaaaatccccagaaccagagccagaggacagt
aaaaatgaaccacccaagacacgacccttagaaactgaattcatggaaggttactctcct
ccatcctcacctgtggattctgatgttgagtacactcccaaacacaagatactcaaatct
catttggaaactgtgcaccaagaatctacatccaagcccaatccaactgtttccaccaac
tcagcatctgacttttctcaagcacaatctgaaaagtcacagaccactcccaataaagta
catgatgagccttctactttcatggtcacaaatgaagaagtggacttcccagacaatgag
gacgaatggtcagatgaagcacaagatattttggtcagacctttcaggactgatcttgca
tccaaggaaccagttccttatacccaatccaacatggatgaaaagaacgacacagttata
aaagagtcttacatggagatggcttctctctctaaaacgagcttcatgcaagacgatata
tatgacagacaatcatttgattatgattatgatgcatcttctcctttggatgacattgat
gacaaagggcaaaacactgctaaggagcggtttctttctgatccttctgaaatccacatt
gaaacactggatacaagcactgcacaaaatgatattccagaggaaaatcaaaatctgggt
gacttgacttcactgactgatagcaagacacttagcggcatcaatgagcaagattttaaa
aagaaaatgaccactgacataacttcagataacatggaaaatggaaactccctctcagca
cagaaaattgattcaaagatccagcaggatactatagcaggtcaccatgcacctgacgca
acaaggaacccagaaagcattgatacagacaggtcagtttctgagcctacagatagcttt
gtggagttcatgcgagagtgcctgaaatctaggcaggatgaagaacatgacaaagtgcac
caaagtgtttcttccaaaactgagttcagcgaaactggttggcttccctcccagtcccct
ccaaccatggtgatggatcttgatcaagaacagcttactataagtgctctcaaagagctg
ggcagcagtcaagaggaggaggtagtgtctcttgagtcgaaggtttctgaccaggacaaa
gctaaccctaacgctacatctatacagcagtcttcctttacctcagttcctaacctcccg
cgttcccaaagtgaccgtgcattcgacaccacatattccaaagaggtggaggccattgac
gaatgggtagccgaagcctatcatcttgctgagcatgtcttgacagcaatactaacccac
gtatcagttaaggatctgatccactggcgagaccccaagaagtcaggcttggtgttcggt
ctgtccatgctgctgctgttgtcgctggcagccttcagcgtcatcagcgtggtctcatac
ctgctactggccctgctctgtgtcaccatcaccttccgcatctacaagtctgtggtccag
gctgtgcagaagtctaacgagggacaccccttcaaaacactcatagataaggatgtcagc
atccctccagagactttccgcaagcacgtggacgccagcctgacctacatcaaccgagcc
ctaaagcagatgagccgcctctttctggtcgaggacctcgtggactccctaaagctggct
gtggtcatgtggctgttgacctatgtaggagctgtcttcaatggaatcaccattctcatc
ctggctgacatcctgctcttcgctgtgcctccagtctatgagaagaacaagactcagatt
gatcagtacattgacctggcacgtactcaagtcaacaccacaatcgccaagttgcaagag
aaacttcccggagctgtgaagcgcagcaaaactgaatga
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integrated database retrieval system
