Lates calcarifer (barramundi perch): 108879762
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Entry
108879762 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 5-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04150
mTOR signaling pathway
lcf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108879762
04150 mTOR signaling pathway
108879762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108879762
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
108879762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
108879762
NCBI-ProteinID:
XP_018526666
UniProt:
A0AAJ7LLL5
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MVLGEQSPDIILPIHVLRNVRAVSYDPLDRLVYWLDGRQNIRRARDDGAMSMIVSSTVQP
VDNQLHDLSLDPYSRHIYWTCETTNTINVQRMDGHTVGVVLKDDTDKPRAIVVNAEKGYM
YFTTVQERSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWVDADLKRIESSDL
TGANRIVLQDSNILQPMGLTVLGDHLYWIDRQQQMIERVDKLTGDGRTRIQGRISYLTSI
HAVEEMDPQEFASHPCSRDNGGCSHICIAKGDGTPRCSCPMHLVLLQDLLRCGEPPTCST
EQFTCSTGEIDCIPMAWRCDGFSECEDGSDEENCPVCSAFQFQCDKGGCIDAQRRCNGEP
DCADNSDEQDCETICPPNQFRCGDNQCITKKQQCDNYSDCPDGSDELACEYVSPPSSGIP
NTGPNTIGPVIAIILLVFVIGGAYFVCQRVVCRRYKGPSGTFPHEYISGTPHVPLNFIAP
SSSQHGTFQGISCGKSMMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSSTKGAFYPQILN
PPPSPATDRSLYNTEIFYSSNSPSTTRSYRPYHPVRGAAPPTTPCSTDVCDSDYTPHHLP
AGLASSAGRWKAAGHGSHGKHNKYYMDLNSDSDPYPPPPTPRSQYLSAEESXPPSPSTER
SYFHLCPPPPSPCTDSS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggttttgggagagcagagtcctgacatcatcctgcccatccatgtcctgaggaacgtg
cgagccgtcagctatgacccgctggaccggctggtctactggctggatggacgacagaac
atacgcagggcgagagatgatggagccatgtccatgatagtgagcagcactgttcagcca
gtggacaaccaacttcacgacctgagcttggacccctacagccgccacatttactggacc
tgtgagacaaccaacaccatcaatgtccagaggatggacggacacaccgtgggtgtggtc
ctgaaggacgacacagacaagccccgggccatcgtggtcaacgctgagaaagggtacatg
tatttcaccacagtgcaggagcgctcagccaagattgaaggagccagtctggacgggaca
gagagggaatctttgttcaccacaggtctgatcagaccagtagctctggctctggacaac
aaactgggaaaactgttctgggttgatgccgacctcaaaagaattgagagcagtgacctg
acaggagccaatcgcattgtcctccaggattccaacattctccagccaatggggctgaca
gttctgggagatcatctgtactggatcgaccggcagcagcagatgatagagagggtggac
aaactgactggagacggacggacacgcatacagggaaggatatcatacctgacctccatc
catgctgtagaggagatggacccacaggagtttgcatcccacccttgttcccgtgacaac
gggggctgctctcatatctgcatcgctaagggtgatggtacacctcgctgctcctgtcca
atgcatctggtgttactgcaggacctgctgcgctgtggagagcctcccacctgctccaca
gagcagttcacctgctccacaggggagatcgactgtattcctatggcctggcgatgtgat
ggcttctctgaatgtgaagacggcagcgatgaggagaactgccccgtctgctcagccttc
cagttccagtgtgataaaggaggctgcattgatgctcaaaggcgctgcaatggtgaaccc
gactgtgctgataactctgacgagcaggactgtgaaactatctgccctcctaaccagttc
cgctgtggtgacaaccagtgcatcactaagaaacaacagtgtgacaattactctgactgt
cccgacggatcagatgaacttgcctgtgaatatgtgtctcctccctccagtggcatcccc
aatactgggcctaacaccattggtccagtcattgccatcatcctgcttgtctttgtgatc
gggggagcttactttgtctgtcagcgtgtggtgtgtcgacgctacaagggccccagtggc
acttttcctcacgagtacatcagcggtacgccccatgtgcccctcaacttcattgccccc
agcagctcccagcacggcaccttccaaggtatttcctgtgggaagtctatgatgagttca
gtcagcctgatgggcagcagcagcagtggagctcctctctatgacaggaaccatgtgact
ggagcctcatccagcagctcatcatctaccaaaggagccttctaccctcagatcctgaac
cctcctccatccccagctactgaccgctctctctacaacacagagatcttctactcctcc
aacagtccatccaccaccaggtcttacagaccctaccacccagtccgtggcgctgcccct
cccactacgccctgcagcaccgacgtctgcgacagcgactacaccccccaccacctgccg
gctggactggcttcgtcagcgggccgctggaaggccgcgggccacggcagccacggcaaa
cacaacaagtactacatggaccttaactcagactcggacccctaccctccgcccccaact
ccccgctctcagtacctgtcagccgaggagagcntgcccccgtccccttccaccgagcgc
tcctacttccacctgtgtcccccccctccctcaccctgcaccgactcctcatga
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