Lates calcarifer (barramundi perch): 108879771
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Entry
108879771 CDS
T04895
Name
(RefSeq) 5-hydroxytryptamine receptor 3C isoform X1
KO
K04819
5-hydroxytryptamine receptor 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108879771
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108879771
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Serotonin (5-HT3)
108879771
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
MamF_MmsF
Motif
Other DBs
NCBI-GeneID:
108879771
NCBI-ProteinID:
XP_018526674
UniProt:
A0AAJ7LNI2
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All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MIPTGFLFLLLLTGGNPSSLEPLEFLDAQQKSNHSFEELPGGNTSSFEVPELLDDQQKSN
HSFEEMPGGNTSLELPELRYGQQSNDKDDWPWNSENCSYHHFLNYLNLSENKNLYSMLRP
VRHHKITTELYLKMVIYAILDVREKDQAFVPYIWIYLSWHNHHIQWDPTEFCGLESVEVP
TELMWKPDINIEEMTERDKTTPAPFMTVNYDGMVELRNDLVVVSTCRMRVYQFPFDKQSC
TLSFKSVIYSDEEIWLYAITNSSKITEWSCQAMRTQYEWLFINMTVTRKTVNYFNFNQSM
IVYTITMRRRSALYIINFILPVLFFLGLDLASFLISHSGGEKLSFKVTVLLAVTVMQLIL
NEILPASSNRIPLIAIYCIGIFALMLVSLLETIFVMYLMKKDNETDRDQALNVRKHACCA
FCCAAETPSQVLSVAEEHNSGQLTVVSHYLEKDSDELRQMEKTQTLISSNNSTTSRNEEE
KPGYWTRMAKKINKVFFIFYVTVVSVFLFSVFSMWNITEATGKNKKYCSI
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgatacccacaggtttcctctttctgctcctcctcacaggtggaaatccctcaagttta
gagccactggagtttcttgatgctcaacaaaagtccaatcacagctttgaggaattgcca
ggtggaaatacctctagttttgaggtaccagagcttcttgatgatcaacagaagtccaat
cacagctttgaagaaatgccaggtggaaataccagtttagagctaccagagcttcgttat
ggtcaacagtccaatgacaaagacgactggccttggaactcggaaaactgcagttatcat
cattttttaaactacctgaacctgtccgaaaacaagaatctgtactccatgttacggcct
gttagacaccacaaaataacaacagaactatacctcaaaatggtaatctatgccatccta
gatgtgagagaaaaggaccaggcttttgttccttacatatggatttatttgagttggcat
aatcatcacattcagtgggatccaacagaattttgtggacttgaaagtgtagaagttccc
actgaactaatgtggaagccagatataaatatcgaagaaatgacagagagagacaagacc
actccagctccttttatgactgttaattacgacggcatggtcgaacttagaaatgacttg
gtggtggtcagcacttgcaggatgcgtgtttaccagttccccttcgacaagcaaagttgc
actctctcattcaagtctgtcatatactctgatgaagaaatatggctgtacgccatcacc
aactcttcaaagattactgagtggtcttgtcaagcgatgcggacgcaatacgagtggctg
ttcatcaacatgacagtcactagaaaaactgtcaactattttaacttcaaccaaagcatg
atcgtttacactatcactatgaggaggaggtcagccctctacatcatcaacttcatactg
cctgtcctgttcttcttgggtctggacttggcctccttcttgatctcacacagcggaggt
gagaagttgagcttcaaggtcactgtgctgctcgctgtcactgtgatgcagcttattctg
aatgaaatcctgcctgcctcgtcaaacaggatcccactcatagcgatctactgcatcggg
atttttgctctgatgttggtcagcctcctggagacaatttttgtgatgtacctgatgaag
aaagacaacgagacagacagagaccaagccctgaatgtgaggaaacatgcttgctgtgca
ttttgctgtgctgctgaaactccatctcaagtgctctctgtagctgaagagcacaacagc
ggccagctgacggtggtatcccactatttggagaaggactcagatgagctgaggcagatg
gagaaaacacagactctgatcagcagcaacaacagcaccaccagcaggaatgaagaagag
aagcctggctactggaccagaatggctaaaaaaatcaacaaagttttcttcattttttac
gtcacagtggtcagtgtgtttttattttcggtcttttccatgtggaacattacagaagcc
actggaaaaaacaaaaaatactgctctatttaa
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